Pairwise Alignments

Query, 307 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  182 bits (463), Expect = 7e-51
 Identities = 101/308 (32%), Positives = 178/308 (57%), Gaps = 6/308 (1%)

Query: 1   MISFILRRLASAVPTLFIVVTISFFLMRFAPGGPFNLERPLPPQT-MENLMRTYH-LDEP 58
           M+ FI +R  +++ +L  ++ + FFL R   G P  L  P+     M+   R  H L++P
Sbjct: 1   MLRFIRQRALASLISLIGLIVMVFFLSRMT-GDPAALFLPVEASAEMKEQFRELHGLNDP 59

Query: 59  LWRQYLIYLRNAVTGDFGPSYIYKDNTVAQLIGKGLPYSLELGSYALLLALVGGVLAGTL 118
           +  Q+  Y+ + VTGD G S + K      ++ +   ++L L    + L     ++ G+L
Sbjct: 60  ILVQFARYVGDVVTGDLGES-LRKARPALDVVLEAFTWTLWLAVITMTLVTGAAIVVGSL 118

Query: 119 AALRQNSAFDFSLMSISTVGITVPNFVVAPVLTLVFAVILGLLPAGSWGDGSLRYLILPM 178
            A R    FD     +S +G +VP+F +A V  ++F++   +LP    G GS+ + ILP+
Sbjct: 119 GAFRSGGFFDRLSSMVSLIGASVPDFWLAIVAIVIFSINFAILPTS--GTGSVVHWILPI 176

Query: 179 IALALPQLAVIARLTRGAMIEALRMDHIRTAKAYGLPARSVVVLHAMRAAMLPVVSYLAP 238
             L +    +I ++ RG+M+ AL   +++TA+A G+ +  ++ +HA+R AMLPV++ +  
Sbjct: 177 AVLFVRPFGIIVQVVRGSMVSALSSAYVKTARAKGVKSGPIIFIHALRNAMLPVITVVGD 236

Query: 239 CAAALLTGSAVIETIFTIPGVGRYFVLGAINRDYTLVMGTVVLVAIFVIVFNLLVDILYG 298
            AA+LL G+ V+ETIF  PGVG+  +   + RD+ +V+  +++ AI + + N+L+D+ Y 
Sbjct: 237 QAASLLNGAVVVETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAIAIFLMNVLIDLAYA 296

Query: 299 LLDPRVRH 306
           LLDPR+RH
Sbjct: 297 LLDPRIRH 304