Pairwise Alignments

Query, 307 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  182 bits (463), Expect = 7e-51
 Identities = 106/309 (34%), Positives = 176/309 (56%), Gaps = 6/309 (1%)

Query: 1   MISFILRRLASAVPTLFIVVTISFFLMRFAPGGPFNLERPLPPQTMEN--LMRTYHLDEP 58
           M +FILRR   ++  +  ++ + FFL R   G P  L  PL     +      T+  ++P
Sbjct: 1   MFAFILRRAGQSLIAVIGLLVLVFFLSRLT-GDPAYLYLPLDSSEAQRQAFSETHGFNDP 59

Query: 59  LWRQYLIYLRNAVTGDFGPSYIYKDNTVAQLIGKGLPYSLELGSYALLLALVGGVLAGTL 118
           L  Q+  YL +    DFG + + ++    ++  +  P +L+L   A++L+L   V+ G+L
Sbjct: 60  LVVQFGRYLVDLARFDFGDA-LSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGSL 118

Query: 119 AALRQNSAFDFSLMSISTVGITVPNFVVAPVLTLVFAVILGLLPAGSWGDGSLRYLILPM 178
           AA R NS FD    + S  G + P+F VA V  LVF+V LGLLP    G G+  + I+P+
Sbjct: 119 AAARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTS--GTGTALHWIMPI 176

Query: 179 IALALPQLAVIARLTRGAMIEALRMDHIRTAKAYGLPARSVVVLHAMRAAMLPVVSYLAP 238
             L L    ++ ++ RG M+ AL   +++TA+A G+    +V  HA+R ++LPV++    
Sbjct: 177 FVLTLRPFGLLVQVVRGTMMGALASPYVKTARAKGVNRSRIVFRHALRNSLLPVITVAGD 236

Query: 239 CAAALLTGSAVIETIFTIPGVGRYFVLGAINRDYTLVMGTVVLVAIFVIVFNLLVDILYG 298
            AA+L+ G+ V+ETIF  PG+G+  +   + RD+ L+  TV++ AI + V N+ +D++Y 
Sbjct: 237 LAASLVNGAVVVETIFGWPGIGKLMIDAIVRRDFALIQATVLVTAIAIFVLNIAIDLVYA 296

Query: 299 LLDPRVRHD 307
            LDPR+R +
Sbjct: 297 RLDPRIRFE 305