Pairwise Alignments

Query, 338 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

 Score =  300 bits (768), Expect = 3e-86
 Identities = 140/220 (63%), Positives = 180/220 (81%)

Query: 119 FFGTDSNGRDMLARVMLGGQISIAVGILASLVSLGIGVLYGATAGYIGGRVDNVMMRFVE 178
           +FGTD+ GRD+  R ++GG+IS+ VGI+ +LV++ IG LYGA +G+IGGR D VMMR +E
Sbjct: 81  WFGTDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILE 140

Query: 179 ILYSLPFVFLVVVLVVFFGRSFILIFLVIGAVEWLDMARIVRGQTLALKRREFVGAAQAL 238
           ILY++PF+FLV+VLV FFGR+ +LIF+ IGA+ WLDMARIVRGQTL+L+ +EF+ AA   
Sbjct: 141 ILYAIPFMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVC 200

Query: 239 GLSDWQIIRRHIIPNTIGPVVVFVTVVVPKVILLESFLSFLGLGVQAPLTSWGALISEGA 298
           G+S W II RHI+PN +G V V+ T+++P +IL ESFLSFLGLGVQ P+TSWGAL+ EGA
Sbjct: 201 GVSKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGA 260

Query: 299 NNIQSAPWLLIFPAIFFVLTLFSLNFVGDGLRDALDPKDR 338
           N ++ A W L+FPA F VLTLF  N+VGDGLRDALDPKDR
Sbjct: 261 NTMEVAIWQLLFPAAFMVLTLFCFNYVGDGLRDALDPKDR 300