Pairwise Alignments

Query, 338 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  172 bits (436), Expect = 1e-47
 Identities = 90/232 (38%), Positives = 138/232 (59%), Gaps = 11/232 (4%)

Query: 116 EYFFFGTDSNGRDMLARVMLGGQISIAVGILASLVSLGIGVLYGATAGYIGGRVDNVMMR 175
           E+F  GTD  GRD+ + ++ G ++S+ +G LA  + L +G++ G +AGY GGR+D+ +MR
Sbjct: 77  EHFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMR 136

Query: 176 FVEILYSLPFVFLVVVLVVFFGRSF----------ILIFLVIGAVEWLDMARIVRGQTLA 225
           F +I  S   + + +++   F  SF          +++ ++IG  EW   AR VR   LA
Sbjct: 137 FADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLA 196

Query: 226 LKRREFVGAAQALGLSDWQIIRRHIIPNTIGPVVVFVTVVVPKVILLESFLSFLGLGVQA 285
            K++E+V AA+ +G    +I+ RHI+PN + P++V  TV V   I+ E+ LSFLGLG+  
Sbjct: 197 EKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPV 256

Query: 286 PLTSWGALISEGANNIQS-APWLLIFPAIFFVLTLFSLNFVGDGLRDALDPK 336
              S G+LIS G   I S A W+  FP I  VL +  +N +GD LRD  +PK
Sbjct: 257 DQPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPK 308