Pairwise Alignments

Query, 511 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  446 bits (1148), Expect = e-130
 Identities = 246/515 (47%), Positives = 340/515 (66%), Gaps = 19/515 (3%)

Query: 1   MNAVKGIDIDVKQGETLAVVGESGSGKSQTMMGIMGLL--ASNGIIEGSAKYRGHELIGL 58
           ++AVK I   + +GETLA++GESGSGKS +   IM L+      I  G     G +L+ +
Sbjct: 22  VHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPPGRISSGEILLDGRDLLTM 81

Query: 59  PVNELNDIRGAKITMIFQEPMTSLDPLYRIGAQIAEPIIYHRGGSKRQARARVLELLKLV 118
           P  E  ++ G ++ MIFQ+P++ L+P+Y +G QI+E +  H G +  +AR   L LL+ V
Sbjct: 82  PAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTH-GLAGSKAREEALRLLRRV 140

Query: 119 GIPEPERRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKS 178
           GIPEPER +  YPHE SGGQRQRVMIAMALA  PD+LIADEPTTALDVT+QA++L LLK 
Sbjct: 141 GIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIADEPTTALDVTVQAEVLKLLKE 200

Query: 179 LQQRFGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGTTEDIFERPQADYTKMLLDAEP 238
           LQ+  GMAV++ITHDLGVV   A+RV VM +G IVE GT  +I++ PQ  YT+ L+ A P
Sbjct: 201 LQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGTVREIYKNPQHPYTQKLIAAAP 260

Query: 239 SG---HKPAVGSEAPVVLSGKNVTIDYKIPGGFLSKSSKFRAVDSVNVDLHQGQTIGIVG 295
                H+P  G+ A  +LS ++V   Y            F A+  ++ DL  G+T+ +VG
Sbjct: 261 GKGAMHEP--GARAEPLLSVRDVRKTY----------GSFEALKGISFDLMPGETMAVVG 308

Query: 296 ESGSGKSTLGRALLRLIVSE-GRIFFGKTEITGLDRKAMRPLRRHLQLVFQDPYGSLSPR 354
           ESGSGKSTL RALLRL   + G   +   ++  L    +  LRR LQ+VFQDP  SL+PR
Sbjct: 309 ESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPAELYKLRRDLQMVFQDPTQSLNPR 368

Query: 355 QTVGEIITEGLFVHEQQLSRAERDKRAIEALKEVGLDPAARNRYPHEFSGGQRQRIAIAR 414
            TV ++I+E   +H   L +A+  +R  E L +VGL     +RYPH+FSGGQRQRIAIAR
Sbjct: 369 MTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLSAEHMSRYPHQFSGGQRQRIAIAR 428

Query: 415 AIILKPEVVILDEPTSALDRSVQGQVIDLLRDLQKAHGLSYIFISHDLSVIKAISDYVIV 474
           A+ L+P+++I DE  SALD SVQ QVI+LL  L++  G+++IFI+HDL V++  +DYV+V
Sbjct: 429 ALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMV 488

Query: 475 MRNGKIVEEGETDAIFSRPTAEYTKTLIKSAFSAE 509
           M+ G++VE G    +F  P   YT+ L+ ++ S +
Sbjct: 489 MQQGEVVELGTVREVFDTPRQAYTRALLAASLSPD 523



 Score =  175 bits (444), Expect = 3e-48
 Identities = 102/263 (38%), Positives = 157/263 (59%), Gaps = 17/263 (6%)

Query: 252 VLSGKNVTIDYKIPGGFLSKSSKFRAVDSVNVDLHQGQTIGIVGESGSGKSTLGRALLRL 311
           +L  +N+++++    G +       AV S++  L +G+T+ I+GESGSGKS    A++ L
Sbjct: 5   LLEVRNLSVEFHTAAGVV------HAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNL 58

Query: 312 I-VSEGRIFFGKTEITGLDRKAMRPLR------RHLQLVFQDPYGSLSPRQTVGEIITEG 364
           I +  GRI  G+  + G D   M          R + ++FQDP   L+P  +VG  I+E 
Sbjct: 59  IDMPPGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEA 118

Query: 365 LFVHEQQLSRAERDKRAIEALKEVGLDPAAR--NRYPHEFSGGQRQRIAIARAIILKPEV 422
           +  H    S+A  +  A+  L+ VG+    R   +YPHEFSGGQRQR+ IA A+ L+P++
Sbjct: 119 MTTHGLAGSKAREE--ALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDL 176

Query: 423 VILDEPTSALDRSVQGQVIDLLRDLQKAHGLSYIFISHDLSVIKAISDYVIVMRNGKIVE 482
           +I DEPT+ALD +VQ +V+ LL++LQ+  G++ + I+HDL V+  I+D V+VM  G IVE
Sbjct: 177 LIADEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVE 236

Query: 483 EGETDAIFSRPTAEYTKTLIKSA 505
            G    I+  P   YT+ LI +A
Sbjct: 237 AGTVREIYKNPQHPYTQKLIAAA 259