Pairwise Alignments
Query, 511 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58
Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021
Score = 465 bits (1196), Expect = e-135
Identities = 250/510 (49%), Positives = 335/510 (65%), Gaps = 9/510 (1%)
Query: 3 AVKGIDIDVKQGETLAVVGESGSGKSQTMMGIMGLLAS--NGIIEGSAKYRGHELIGLPV 60
A G+ V GETL ++GESGSGKS + IMGL+ + I GS YRG +L L
Sbjct: 25 ATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPGDICAGSVAYRGRDLSSLSE 84
Query: 61 NELNDIRGAKITMIFQEPMTSLDPLYRIGAQIAEPIIYHRGGSKRQARARVLELLKLVGI 120
E D+ G +I MIFQ+P++ L+P+Y IG Q+ E H S +AR R +E+L VGI
Sbjct: 85 GERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGVASGAEARQRAIEILGRVGI 144
Query: 121 PEPERRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKSLQ 180
PEPE+RID YPH+ SGGQRQR+MI MA+A P+ILIADEPTTALDV++QAQIL+LLK LQ
Sbjct: 145 PEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPTTALDVSVQAQILELLKKLQ 204
Query: 181 QRFGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGTTEDIFERPQADYTKMLLDAEPSG 240
G+A+++ITHDL V + A+RV VM+ G IVE G +FE P YT+ L++A P
Sbjct: 205 AEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAVFENPAHSYTRTLINALPHA 264
Query: 241 H-----KPAVGSEAPVVLSGKNVTIDYKIPGGFLSKSSKFRAVDSVNVDLHQGQTIGIVG 295
+PA + P +L KN+ Y + GF +K ++ AV +++ D+ G+TIGIVG
Sbjct: 265 DDRAPPRPARPAGKP-ILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVG 323
Query: 296 ESGSGKSTLGRALLRL-IVSEGRIFFGKTEITGLDRKAMRPLRRHLQLVFQDPYGSLSPR 354
ESGSGKST+ R LL L S G F ++ +DRK + RR +Q+VFQDPY S++PR
Sbjct: 324 ESGSGKSTVARVLLGLNEASGGEALFHGRDVLKMDRKQLLAFRRKVQMVFQDPYSSMNPR 383
Query: 355 QTVGEIITEGLFVHEQQLSRAERDKRAIEALKEVGLDPAARNRYPHEFSGGQRQRIAIAR 414
TV +I++E +H+ L + R E L VGL+P RYPH+FSGGQRQRIAIAR
Sbjct: 384 MTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGLNPEHAKRYPHQFSGGQRQRIAIAR 443
Query: 415 AIILKPEVVILDEPTSALDRSVQGQVIDLLRDLQKAHGLSYIFISHDLSVIKAISDYVIV 474
A+ PE+V+ DE SALD SVQ QVIDLL +L+ GL+YIFI+HDL +++ +D +IV
Sbjct: 444 ALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIV 503
Query: 475 MRNGKIVEEGETDAIFSRPTAEYTKTLIKS 504
M++G+IVE T+ IF P YT+ LI +
Sbjct: 504 MKSGEIVEHATTEEIFRNPQHAYTRQLINA 533
Score = 202 bits (513), Expect = 3e-56
Identities = 109/240 (45%), Positives = 160/240 (66%), Gaps = 9/240 (3%)
Query: 1 MNAVKGIDIDVKQGETLAVVGESGSGKSQTMMGIMGLLASNGIIEGSAKYRGHELIGLPV 60
++AVK + DV GET+ +VGESGSGKS ++GL ++G G A + G +++ +
Sbjct: 303 LHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASG---GEALFHGRDVLKMDR 359
Query: 61 NELNDIRGAKITMIFQEPMTSLDPLYRIGAQIAEPIIYHRGG-SKRQARARVLELLKLVG 119
+L R K+ M+FQ+P +S++P + ++EP H+ K + R RV ELL LVG
Sbjct: 360 KQLLAFR-RKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVG 418
Query: 120 I-PEPERRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKS 178
+ PE +R YPH+ SGGQRQR+ IA ALA +P++++ DE +ALDV++Q Q++DLL
Sbjct: 419 LNPEHAKR---YPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAE 475
Query: 179 LQQRFGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGTTEDIFERPQADYTKMLLDAEP 238
L+ R G+A + ITHDL +VRHFA+R+ VM+ GEIVE TTE+IF PQ YT+ L++A P
Sbjct: 476 LRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINATP 535
Score = 194 bits (493), Expect = 7e-54
Identities = 116/264 (43%), Positives = 163/264 (61%), Gaps = 16/264 (6%)
Query: 250 PVVLSGKNVTIDYKIPGGFLSKSSKFRAVDSVNVDLHQGQTIGIVGESGSGKSTLGRALL 309
P +L K++T+D FLS FRA V+ + G+T+ I+GESGSGKS A++
Sbjct: 4 PHLLEVKDLTVD------FLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIM 57
Query: 310 RLI------VSEGRIFFGKTEITGLDRKAMRPLR-RHLQLVFQDPYGSLSPRQTVGEIIT 362
LI + G + + +++ L R L R + ++FQDP L+P T+G +
Sbjct: 58 GLIDTPPGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLE 117
Query: 363 EGLFVHEQQLSRAERDKRAIEALKEVGL-DPAAR-NRYPHEFSGGQRQRIAIARAIILKP 420
E VH S AE +RAIE L VG+ +P R ++YPH+FSGGQRQRI I AI L+P
Sbjct: 118 EVFTVH-GVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRP 176
Query: 421 EVVILDEPTSALDRSVQGQVIDLLRDLQKAHGLSYIFISHDLSVIKAISDYVIVMRNGKI 480
E++I DEPT+ALD SVQ Q+++LL+ LQ GL+ I I+HDL V ++D VIVM++G+I
Sbjct: 177 EILIADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRI 236
Query: 481 VEEGETDAIFSRPTAEYTKTLIKS 504
VEEGE A+F P YT+TLI +
Sbjct: 237 VEEGEARAVFENPAHSYTRTLINA 260