Pairwise Alignments

Query, 511 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 553 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  548 bits (1413), Expect = e-160
 Identities = 288/512 (56%), Positives = 373/512 (72%), Gaps = 4/512 (0%)

Query: 1   MNAVKGIDIDVKQGETLAVVGESGSGKSQTMMGIMGLLASNGIIE--GSAKYRGHELIGL 58
           ++AV+G+   + +GETLA+VGESGSGKS T + I  LL         G+  +   +L+  
Sbjct: 34  VDAVRGVSFTIAKGETLALVGESGSGKSVTALSITRLLPYPPASHPGGAIFFDSEDLLHA 93

Query: 59  PVNELNDIRGAKITMIFQEPMTSLDPLYRIGAQIAEPIIYHRGGSKRQARARVLELLKLV 118
           P   L D+RG +I+MIFQEPMTSL+PL+ I  Q+ E +  H+G   +  RARV++LL+LV
Sbjct: 94  PGARLRDVRGNRISMIFQEPMTSLNPLHSIERQVGEVLTLHKGLHGKARRARVIDLLRLV 153

Query: 119 GIPEPERRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKS 178
           G+P+ E R+ + PHELSGGQRQRVMIAMALANEPD+LIADEPTTALDVTIQAQIL LL  
Sbjct: 154 GLPQVEGRLGALPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTIQAQILALLAD 213

Query: 179 LQQRFGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGTTEDIFERPQADYTKMLLDAEP 238
           LQ+RFGMA++ ITHDL +VR  A+RVAVM+ G IVETGTT  +F  P   YTK LL +EP
Sbjct: 214 LQKRFGMAILFITHDLSIVRRVADRVAVMKDGLIVETGTTAALFAAPSHPYTKALLASEP 273

Query: 239 SGHKPAVGSEAPVVLSGKNVTIDYKIPGGFLSKS-SKFRAVDSVNVDLHQGQTIGIVGES 297
            G  P +   AP +LS  ++ + + I  G + ++    +AVD ++  L  G+T+G+VGES
Sbjct: 274 RG-TPRLVPNAPEILSCDDLKVWFPIRKGVIRRTVGHIKAVDGISFSLKAGETLGVVGES 332

Query: 298 GSGKSTLGRALLRLIVSEGRIFFGKTEITGLDRKAMRPLRRHLQLVFQDPYGSLSPRQTV 357
           GSGK+TLG  LLRL+ S+G I F  T + GL   AMRPLRR LQ+VFQDPYGSLSPR +V
Sbjct: 333 GSGKTTLGLGLLRLVSSQGAIVFSGTRLDGLSNTAMRPLRRRLQIVFQDPYGSLSPRLSV 392

Query: 358 GEIITEGLFVHEQQLSRAERDKRAIEALKEVGLDPAARNRYPHEFSGGQRQRIAIARAII 417
           GEII EGL VH     RA R     +AL EVGLDPA ++RYPHEFSGGQRQRIAIARA++
Sbjct: 393 GEIIGEGLAVHGLAGDRAGRRALVTQALSEVGLDPATQDRYPHEFSGGQRQRIAIARALV 452

Query: 418 LKPEVVILDEPTSALDRSVQGQVIDLLRDLQKAHGLSYIFISHDLSVIKAISDYVIVMRN 477
           LKPEV++LDEPTSALD +VQ Q++DLLRD+Q  H ++Y+FISHDL V++A++  V+VM++
Sbjct: 453 LKPEVIVLDEPTSALDVTVQAQIVDLLRDIQTRHAIAYVFISHDLRVVRALAAQVLVMKD 512

Query: 478 GKIVEEGETDAIFSRPTAEYTKTLIKSAFSAE 509
           GK+VE G  + IF  P  +YT+ L+ +A S E
Sbjct: 513 GKVVEAGSGEQIFQAPRHDYTRALLAAALSLE 544