Pairwise Alignments

Query, 352 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score = 78.2 bits (191), Expect = 3e-19
 Identities = 88/347 (25%), Positives = 147/347 (42%), Gaps = 23/347 (6%)

Query: 6   TQRDIAIFAGVSQATVSLVLNEAKSAEGRIPPETRERVLKAIRDTGYVADPIARSMVKGA 65
           T +D+A  AGVS ATVS  L   +    ++   TR+RV +A+ + GY  + +AR++ +  
Sbjct: 3   TMKDVAQLAGVSTATVSRALMNPE----KVSSSTRKRVEEAVLEAGYSPNSLARNLRRNE 58

Query: 66  NRILGVFTYQPAFPIAQADFYTPFLMGIEEEAERLGYDLLLMTAAERDDNGRKRIFGETG 125
           ++     T     P     +++  + GIE+ A   GY +LL  + ++    R+  F    
Sbjct: 59  SK-----TIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQ--KRRENSFVNLV 111

Query: 126 RLRLADGCLILGSQFDRDELAQLVAGDYPYVAVGRRDDAGGPVRYVGADYVTATHALVRE 185
             + ADG L+LG+    D +++    + P + +         +  V  D +T+    V  
Sbjct: 112 FTKQADGMLLLGTDLPFD-VSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNY 170

Query: 186 ALVAGHRRFAFIGATGPAESISDRWRGFLTAIEGAAELVYSHESENGD--------PAEQ 237
               GH+R A I     A     R +G+  A+  A   +       GD           Q
Sbjct: 171 LTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQ 230

Query: 238 LAAVRASGASVVFFAEVAEAVVFDNHARAQGVSVPGDLSIVVLGSGTRTHTLRLQRDFTS 297
           L A+     + +F      A+     A+  G+ VP DLS+V  G              T+
Sbjct: 231 LLAL-PEQPTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVV--GFDDIQFAQYCDPPLTT 287

Query: 298 YAIPREEMGRQATSMLVETLTSPPGPVRQILLGCDIVAGETLASPTQ 344
            + PR E+GRQA  M++E L          LL   +V  E+ A P++
Sbjct: 288 ISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLETKLVVRESAAPPSK 334