Pairwise Alignments

Query, 419 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 424 a.a., ABC transporter for Lactose, periplasmic substrate-binding component (from data) from Sinorhizobium meliloti 1021

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 62/276 (22%), Positives = 108/276 (39%), Gaps = 18/276 (6%)

Query: 20  VSPALSQELRMAIWSANEAHLALFNEIADEFEASHPGVKITYDSLAYEGYATTLTTQIAG 79
           V+ A ++E+ +  W  N  ++A+  E    +  +HP V       A       L T ++ 
Sbjct: 25  VTAAQAKEITIWCWDPN-FNVAIMKEAGARYTKTHPDVTFNIVDFAKLDVEQKLQTGLSS 83

Query: 80  GNP---PDLAWLFDTTAPDFMAA--GALYPLTETFANTQGYDMGDFPPATLAAWSYEGTQ 134
           G     PD+  + D  A  ++ +  GA  PL+ T       D   F P  +   + +G  
Sbjct: 84  GTADALPDIVLIEDYGAQKYLQSFPGAFAPLSGTV------DYSGFAPYKVELMTLDGQV 137

Query: 135 YLYPFSTSPFGVFVNNDMIRAAGAKTPAEMIAAGDWNWDNAIATAAKV-AATGKQGLIIR 193
           Y  PF +   G++   D + AAG K P +M    D  WD  I    +V   TGK+ + + 
Sbjct: 138 YGMPFDSGVTGLYYRKDYLEAAGFK-PEDM---QDLTWDRFIEIGKQVEEKTGKKMMGLD 193

Query: 194 DFEYKAWENLAEVYTGWNAYPWSKDTKSCAFASPEMVDAMRFIHDAIFVKKAMPGPGVSA 253
             +      + +    W      K   +   A    ++ +  I  A   K A        
Sbjct: 194 PNDAGLVRIIMQSAGQWYFDKEGKPNIAGNAALKAALETIGKIMQANIYKPANGWSDWVG 253

Query: 254 DFFAGDAAMTTTQI-SRAALLPKGDKAFDWDLVPLP 288
            F +GD A   T +     +  + D++ +W + P+P
Sbjct: 254 TFTSGDVATVVTGVWITGTVKAQPDQSGNWGVAPIP 289