Pairwise Alignments

Query, 308 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 291 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  128 bits (321), Expect = 2e-34
 Identities = 83/283 (29%), Positives = 145/283 (51%), Gaps = 3/283 (1%)

Query: 21  RRDAATGYLFIAPQLIGIVVFVLVPLVLVFWYSLHEWNVLAGSFRFTGIANYQKLLSDPA 80
           R    T  L I P +I  +     P+  +F  S      L G   + G  NY KLL+   
Sbjct: 6   RSKTLTAVLMITPFVITYLTVFAYPVYKMFALSFTN-APLVGEGEWVGFDNYLKLLNQKL 64

Query: 81  IGEVLAVTAVFSAGLALLNMSLALGLALLLNQQLAFM-TMFRTLFFSPVVVSLVAWTIVW 139
               +  T  F     + N  + LGLAL++ +   ++ ++   LFF P ++ +   T +W
Sbjct: 65  FFTSVWNTGYFVVLTVIPNTLIGLGLALMVVRLKGWLQSLILVLFFLPYILPVSVVTQIW 124

Query: 140 SFLLQNNGGI-NGLLQMIGVEGPNWLRHPTTAMISVIVVQALKNVGLNMILFLAALQGVP 198
            ++L    GI   +++ +     +  R P  AM  V +V      G N++LF+A L+ +P
Sbjct: 125 EWVLDQQFGIAQHVIEFVTGRRISVFRDPLWAMPMVALVTIWWTNGFNLLLFIAGLRNIP 184

Query: 199 RELFEAARVDGVPRFKQFYRITLPMISPTILLASIVTIVGALQVFAQIMILTQGGPGFST 258
            + +EAA +DG  R++ F RIT P+I P   L   + ++  L++F Q+ ++T+GGP  ST
Sbjct: 185 TDYYEAAMLDGATRWQCFKRITWPLIWPVTALVLTLQLILQLKIFDQVYLMTEGGPFNST 244

Query: 259 TVLVYYLYQQAFQFYLFGYGSTLSIILLVIVGALTFIQWHLRR 301
            VL+  +Y++AF+    G GS +++ L +I+  ++ +Q+ L R
Sbjct: 245 YVLLQLVYREAFRLNHGGLGSAVAVFLFLIIVTVSVLQYQLLR 287