Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 278 a.a., Sugar ABC transporter, sugar permease protein 2 USSDB1D from Xanthomonas campestris pv. campestris strain 8004

 Score =  177 bits (450), Expect = 2e-49
 Identities = 87/264 (32%), Positives = 160/264 (60%), Gaps = 4/264 (1%)

Query: 17  LCVLLVPFVFPTWWMVTSSVKPVSQIFAFPPDIWPRTFDFSSYSDVFRIQPFALQYWNSA 76
           L +L +  + P  WM++ S  P  +   FPP + P  F  ++Y ++F     A  + NS 
Sbjct: 19  LLLLALVSLAPLLWMLSVSFMPTGEASRFPPPMLPSAFTLANYHELFARTGMARNFANSL 78

Query: 77  YIAAIVTIGTMAVASMAGYAFARIRFPFANAIFMVVLVGLLIPSEVTLVPLFRMFLKWGM 136
            ++ ++T+G++ + +MAGYAFA+++F     IF +++  L+IP++V ++PLF +  +  +
Sbjct: 79  MVSGLITLGSLLINTMAGYAFAKLQFIGRERIFKILMAALVIPAQVAMLPLFLLMKQLHL 138

Query: 137 INTHWPLILVPIFGAPAVFATFIMRQFFISLPVELEEAAWVDGLSRFKIFWTIALPLARP 196
           +N    +++  +     VF  F++RQ+  S+P EL EAA +DG S  +IF+ I LP+ +P
Sbjct: 139 VNNIGGVVVPAL---ATVFGIFLVRQYARSIPDELIEAARIDGASEMRIFFQIVLPMLKP 195

Query: 197 ALAAVAIFTFLGSWNLYLEPIVFLSSPDKFTLPQALTQFTDAYGGPMWNIQLAAATMTAI 256
            L  + IFTF+GSWN ++ P++ L+  +++TLP AL   +  +   +  + +A A +T I
Sbjct: 196 VLVTLTIFTFMGSWNDFMWPLIVLTDQEQYTLPVALAALSREHIMDV-ELMMAGAVVTVI 254

Query: 257 PVLIVFIVAQKQFVEGLAHTGLKG 280
           PVL++F+  Q+ +++GL    +KG
Sbjct: 255 PVLLLFLALQRYYIQGLLLGSVKG 278