Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 283 a.a., sugar ABC transporter permease from Rahnella sp. WP5

 Score =  147 bits (370), Expect = 3e-40
 Identities = 85/270 (31%), Positives = 141/270 (52%), Gaps = 4/270 (1%)

Query: 12  LIYFILCVLLVPFVFPTWWMVTSSVKPVSQIFAFPPDIWPRTFDFSSYSDVFRIQP-FAL 70
           L YF+L ++ V  ++P  W V +S+   + + +    I P    F  Y D+F  +  +  
Sbjct: 17  LSYFLLLIVAVIIIYPLIWTVGASLNAGNSLLS--TSIIPENVSFQHYKDLFNGEVNYVG 74

Query: 71  QYWNSAYIAAIVTIGTMAVASMAGYAFARIRFPFANAIFMVVLVGLLIPSEVTLVPLFRM 130
            YWNS  I+ +  I T+   S   Y+F+R RF       M+ L+  +IP    L+ +F +
Sbjct: 75  WYWNSMKISFLTMILTLICVSFTAYSFSRFRFKGRKDGLMLFLLLQMIPQFSALIAIFVL 134

Query: 131 FLKWGMINTHWPLILVPIFGAPAVFATFIMRQFFISLPVELEEAAWVDGLSRFKIFWTIA 190
               G+IN+H  L+L+ + G      T++M+ +  ++P +L+E+A +DG   F+IF  I 
Sbjct: 135 AQLLGLINSHLALVLIYV-GGMIPMNTYLMKGYLDAIPKDLDESARMDGAGNFRIFIEII 193

Query: 191 LPLARPALAAVAIFTFLGSWNLYLEPIVFLSSPDKFTLPQALTQFTDAYGGPMWNIQLAA 250
           +PL++P LA +A+F+F G    ++     L +PDK+TLP  L        G  + +  A 
Sbjct: 194 MPLSKPILAVIALFSFTGPLGDFILSSTILRTPDKYTLPIGLYNLVAQKMGANYTMYAAG 253

Query: 251 ATMTAIPVLIVFIVAQKQFVEGLAHTGLKG 280
           A + A+PV I ++  QK FV GL     KG
Sbjct: 254 AVLIAVPVAIFYLALQKYFVSGLTAGSTKG 283