Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 281 a.a., carbohydrate ABC transporter permease from Rahnella sp. WP5

 Score =  131 bits (330), Expect = 1e-35
 Identities = 83/276 (30%), Positives = 150/276 (54%), Gaps = 18/276 (6%)

Query: 14  YFILCVLLVPFVFPTWWMVTSSVKPVSQIFAFPPDIWPRTFDFSSYSDVFRIQ--PFALQ 71
           Y  L + L   +FP + M+ +S K   +  +  P ++P+ +DF  Y D+F  Q  PF   
Sbjct: 15  YASLLIFLGAMLFPFFIMLMTSFKSSKEAISRHPTLFPQEWDFHHYVDIFNPQIFPFLSY 74

Query: 72  YWNSAYIAAIVTIGTMAVASMAGYAFARIRFP---FANAIFMVVLV--GLLIPSEVTLVP 126
           + NS  ++ + ++  +    +  YA +R+RF      NA F  V +  G+L+     +VP
Sbjct: 75  FKNSLTVSVLASVIAVFFGILGAYALSRLRFKGRVTINASFYTVYMFSGILL-----VVP 129

Query: 127 LFRMFLKWGMINTHWPLILVPIFGAPAVFATFIMRQFFISLPVELEEAAWVDGLSRFKIF 186
           LF++    G+ +T   L++  +       A F+++ +F ++P ++EEAA +DGL+R +I 
Sbjct: 130 LFKIISALGLYDTTTALVITMVVQTLPT-AVFMLKSYFDTIPHDIEEAAMMDGLNRLQII 188

Query: 187 WTIALPLARPALAAVAIFTFLGSWNLYLEPIVFLSSPDKFTLPQALTQF--TDAYGGPMW 244
           + I +PLA   + +V ++ F+ +WN YL   +FLSS   FTLP  L     T  Y   +W
Sbjct: 189 FYITVPLAISGIISVFVYCFMVAWNDYLFASIFLSSSANFTLPVGLNTLFSTPDY---VW 245

Query: 245 NIQLAAATMTAIPVLIVFIVAQKQFVEGLAHTGLKG 280
              +AA+ +TA+PV++++ ++++     L   G+KG
Sbjct: 246 GRMMAASLVTALPVVLMYALSERFIKGNLTDGGVKG 281