Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 295 a.a., carbohydrate ABC transporter permease from Bifidobacterium breve UCC2003

 Score =  187 bits (474), Expect = 3e-52
 Identities = 100/272 (36%), Positives = 153/272 (56%), Gaps = 3/272 (1%)

Query: 8   RAQTLIYFILCVLLVPFVFPTWWMVTSSVKPVSQIFAFPPDIWPRTFDFSSYSDVFRIQP 67
           + + + Y +L V+ + ++FP  WM   S+K   +I A PP + P     +++S  F    
Sbjct: 27  KGRGISYIVLAVIGIVWIFPFLWMALGSLKTQREILAKPPKLMPEHATLANFSQWFTQLN 86

Query: 68  FALQYWNSAYIAAIVTIGTMAVASMAGYAFARIRFPFANAIFMVVLVGLLIPSEVTLVPL 127
           F   + NS  +A I  +G M   SM GYA A+++F   N +F  V+V L++PS  T VPL
Sbjct: 87  FGSYFTNSLIVAVITVLGNMVFCSMVGYALAKMKFAGKNILFGAVMVTLMVPSVATFVPL 146

Query: 128 FRMFLKWGMINTHWPLILVPIFGAPAVFATFIMRQFFISLPVELEEAAWVDGLSRFKIFW 187
           F +     + NT+  LIL P    P     F+MRQF   +P  L EAA VDG    +IF+
Sbjct: 147 FVIISNMHLANTYAALIL-PFLCQP--IGVFLMRQFIGGIPDALMEAARVDGAGELRIFF 203

Query: 188 TIALPLARPALAAVAIFTFLGSWNLYLEPIVFLSSPDKFTLPQALTQFTDAYGGPMWNIQ 247
            I LP   PALA ++I TFL SWN +L P+V   S + +TLP AL+ ++       +++ 
Sbjct: 204 QIILPQCGPALATLSILTFLSSWNNFLWPLVSAQSEEMYTLPVALSLYSTGQNATNYSVL 263

Query: 248 LAAATMTAIPVLIVFIVAQKQFVEGLAHTGLK 279
           LA A +   P+L++F+  Q+ F++G+A TG+K
Sbjct: 264 LAGAVLVITPILLLFVFLQRYFIQGVAMTGIK 295