Pairwise Alignments

Query, 266 a.a., polyamine ABC transporter permease from Agrobacterium fabrum C58

Subject, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

 Score =  125 bits (315), Expect = 7e-34
 Identities = 70/235 (29%), Positives = 129/235 (54%), Gaps = 1/235 (0%)

Query: 21  LTSAFLILPIVFIAALSFGSSQWLIFPPPGWTLKWYADFFADPRWLEAAWTSLRIALMVT 80
           L   FL LPI+ + A SF  +++ I    G+T KWY     +   ++AAW S+ +A+   
Sbjct: 12  LVYLFLYLPIIVLIANSFNENKFGI-KWGGFTTKWYHALMNNDSLMQAAWHSINVAVFSA 70

Query: 81  VLSVLIGLVASFGLVRGRFLGRGTLRALFMTPMILPVVVLAVALYAFFLKLGLAGTTTGF 140
             + LIG + +  L R +F G+  +  +    M+ P +V+A++L A FL +G        
Sbjct: 71  TAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGFFTL 130

Query: 141 VIAHLVVALPFSILALTGALEGFDKSIEDAAVLCGASPLQAKIRITLPAISHGLFSAAIF 200
           +IAH+   LPF ++ +   L GFD  + +AA   GA       +I LP     + +  + 
Sbjct: 131 LIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAGWLL 190

Query: 201 SFLTSWDEVVLAIFMASPTLQTLPVKIWATLRQDLTPVIAAASTLLIAVTIILML 255
           SF  S D+V+++ F+  PT + LP+KI++ ++  ++P + A +T+++ V+++L++
Sbjct: 191 SFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLVV 245