Pairwise Alignments

Query, 336 a.a., polyamine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 63.9 bits (154), Expect = 6e-15
 Identities = 72/297 (24%), Positives = 121/297 (40%), Gaps = 31/297 (10%)

Query: 5   LVLSTCAALFALGAAAQANDLVFSSWGGTTQDAQKAAWAEKFMVETGINVLQDGPTDYGK 64
           LVLS   A   + A    N     +WGG   +    A+ ++  V    +  ++  + Y K
Sbjct: 8   LVLSAVVASSQVYAEQTLN---VYAWGGYLPEKSLKAFEQQEGVTINYSTFENNESMYTK 64

Query: 65  LKAMVEANGVTWDVVDVEGDYAAQAGPKGLLEKLDFSVIDKTK----------LDP--RF 112
           LK +    G  +DVV     +  + G +GLL ++D + I   K           DP  +F
Sbjct: 65  LKLL---KGTGYDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLAHDPQNKF 121

Query: 113 VTDYSVG--SFYYSFVIGCNVDSVSACPKSWADLFDTAKFPGKRTFYKWSAPGVIEAALL 170
              Y  G    YY      N  ++      WADL+D  K   ++         V   AL 
Sbjct: 122 SLPYIWGITGLYY------NSSTLPNGITKWADLWD--KQYEQQVMLIDDIRDVFGMALK 173

Query: 171 ADGVTADKLYPLDLDRAFKKLDTIKSDIIWWSGGAQSQQLIASAEAPFGSVWNGR--MTA 228
            +G + +     ++ +A++ L  +K +++ ++  A     + S EA  G  WNG      
Sbjct: 174 LNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYV-SGEATLGMQWNGNAYQGQ 232

Query: 229 LEQSGVKVETSWAQNITAADSLVVPKGTKNKDAAMKFIALATSAQAQADMATATGYA 285
           +E   +K        +   D+  +P G+KN   A KFI      + QA++  + GYA
Sbjct: 233 VEMPELKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYA 289