Pairwise Alignments

Query, 336 a.a., polyamine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 73.9 bits (180), Expect = 5e-18
 Identities = 77/318 (24%), Positives = 133/318 (41%), Gaps = 22/318 (6%)

Query: 8   STCAALFALG-AAAQANDLVFSSWGGTTQDAQKAAWAEKFMVETGINVLQDGPTDYGKLK 66
           S CA     G AAA+  +LVF +WG        +   E+F  ETGI V+         L 
Sbjct: 11  SACALSLLSGTAAAEDKELVFMNWGPYIN----SGILEQFTKETGIKVIYSTYESNETLY 66

Query: 67  AMVEANGVTWDVVDVEGDYAAQAGPKGLLEKLDFSVIDKTK-LDPRFV-------TDYSV 118
           A ++ +   +D+V     + A+   +G+L+K+D S +   K LD  ++        DYS+
Sbjct: 67  AKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYDPNNDYSI 126

Query: 119 GSFYYSFVIGCNVDSVSACP-KSWADLFDTAKFPGKRTFYKWSAPGVIEAALLADGVTAD 177
                   +  N D       +SW DL+   +  G+          V   AL   G + +
Sbjct: 127 PHVVAITGLAVNTDMYDPNDFQSWGDLW-KPELKGQLMLMD-DTREVFHIALRKLGYSGN 184

Query: 178 KLYPLDLDRAFKKLDTIKSDIIWWSGGAQSQQLIASAEAPFGSVWNGRMTALEQSGVKVE 237
                 +D A+ +L  +  +++ ++    +   + S E   G +WNG   A ++ G+ ++
Sbjct: 185 STDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYL-SGEVGLGMLWNGSAAAAQKEGLPIK 243

Query: 238 TSWAQ--NITAADSLVVPKGTKNKDAAMKFIALATSAQAQADMATATGY-APVNIESAKL 294
             + +   I   D+  +  G KN DAA K I      +    ++  TGY   V   + K 
Sbjct: 244 LVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKF 303

Query: 295 MDPKIAKSLPDQQTESQV 312
            D  +A   P Q+   +V
Sbjct: 304 QD--VAPLFPSQEDLDRV 319