Pairwise Alignments

Query, 336 a.a., polyamine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 96.7 bits (239), Expect = 8e-25
 Identities = 89/341 (26%), Positives = 153/341 (44%), Gaps = 25/341 (7%)

Query: 1   MRSKLVLST--CAALFALGAAAQANDLVFSSWGGTTQDAQKAAWAEKFMVETGINVLQDG 58
           M++KL  S    AALF   A A+  +L F +W     +   +   E F  ETGI V+   
Sbjct: 1   MKNKLFASALCAAALFTTNAMAKDQELYFYNWS----EYIPSEVLEDFTKETGIKVIYST 56

Query: 59  PTDYGKLKAMVEANGVTWDVVDVEGDYAAQAGPKGLLEKLDFSVIDKTK-LDPRFV---- 113
                 + A ++  G  +D+V     + ++   +G+L+++D S +   K LDP ++    
Sbjct: 57  YESNESMYAKLKTQGAGYDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPF 116

Query: 114 ---TDYSVGSFYYSFVIGCNVDSV-SACPKSWADLFDTAKFPGKRTFYKWSAPGVIEAAL 169
                +S+   + +  IG N D +     K+W DL+D AK+ G+       A  V   AL
Sbjct: 117 DPGNKFSIPYIWGATGIGINTDMLDKKSLKNWGDLWD-AKWAGQLMLMD-DAREVFHIAL 174

Query: 170 LADGVTADKLYPLDLDRAFKKLDTIKSDIIWWSGGAQSQQLIASAEAPFGSVWNGRMTAL 229
              G + +   P ++  A+++L  +  +++ ++    +   +A  E   G +WNG     
Sbjct: 175 SKLGYSPNTTNPKEIKAAYRELKKLMPNVLVFNSDFPANPYLA-GEVSLGMLWNGSAYMA 233

Query: 230 EQSGVKVETSWAQNITA--ADSLVVPKGTKNKDAAMKFIALATSAQAQADMATATGYAPV 287
            Q G  ++  W +  T    DS+ +P G KN +AA K I      +  A +A   GY P 
Sbjct: 234 RQEGAPIQIIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGY-PT 292

Query: 288 NIESAKLMDPKIAKSLPDQQTESQVNADMNYWAQHRDEIGE 328
            +++A  + PK   + P       V  D   W   +DE+GE
Sbjct: 293 PVKTAHDLLPKEFANDPSIYPPQSV-IDNGEW---QDEVGE 329