Pairwise Alignments

Query, 336 a.a., polyamine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 340 a.a., spermidineputrescine ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 90/321 (28%), Positives = 136/321 (42%), Gaps = 34/321 (10%)

Query: 1   MRSKLVLSTCAALF-ALGAAAQANDLVFSSWGGTTQDAQKAAWAEKFMVETGINVLQDGP 59
           M+  L+ ST   L  A GA+AQ   L  S +G   QDA K    + F  + G  ++ +  
Sbjct: 1   MKKILIASTALLLIGAHGASAQEKTLTISVYG-FAQDAFKELVYDPFEAKCGCKLVVETG 59

Query: 60  TDYGKLKAMV--EANGVTWDVVDVEGDYAAQAGPKGLLEKLDFSVIDK-TKL-----DPR 111
               +L  M   +AN V  D+  V    A  A   GL++K+D S +    KL     DP 
Sbjct: 60  NSVERLAKMEANKANPVV-DMAVVSMADALSATRAGLIDKIDTSKLSNFDKLYDIAKDPN 118

Query: 112 FVTDYSVGSFYYSFVIGCNVDSVSACPKSWADLFDTAKFPGKRTFYKWSAPGVIE----A 167
                S+G  +Y+  I    D V     SWADL       G +     + P V       
Sbjct: 119 G-DGMSIGYTFYATSIVYRSDKVEVT--SWADLL------GDKLAGHVALPNVTTNQGPP 169

Query: 168 ALLADGVTADKLYPLDLDRAFKKLDTIKSDII-WWSGGAQSQQLIASAE---APFGSV-W 222
            L   G    +  P DL  A   +   K DI+ ++   +Q  QL+   E   AP G   W
Sbjct: 170 TLYMIGEALGQNTP-DLKAAIAAVGEKKDDIVTFYVKSSQLVQLMQQEEIWAAPIGRFSW 228

Query: 223 NGRMTALEQSGVKVETSWAQNITAADSLVVPKGTKNKDAAMKFIALATSAQAQADMATAT 282
            G  T ++   +K  T         + +V+ KG+KN+D A++F+    S + Q  +A   
Sbjct: 229 EG-FTKMDLP-IKWATPKEGQTGGMNVMVLAKGSKNQDLALQFMDFWLSTEIQTALAEKL 286

Query: 283 GYAPVNIESAKLMDPKIAKSL 303
             +P N E    + P+IA++L
Sbjct: 287 VDSPANKEVK--VSPEIAENL 305