Pairwise Alignments

Query, 336 a.a., polyamine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 366 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 47.4 bits (111), Expect = 6e-10
 Identities = 74/306 (24%), Positives = 124/306 (40%), Gaps = 34/306 (11%)

Query: 41  AWAEKFMVETGINVLQDGPTDYGKLKAMVEANGVT--WDVVDVEGDYAAQAGPKGLLEKL 98
           ++ ++F  +TGI V      D GK   ++ A G T   D+V V G   +Q     LL  L
Sbjct: 50  SFIDQFQKDTGIEVRIRLTDDQGKQYNVLSAEGETPSTDIVTVTGHRLSQFIGSKLLTPL 109

Query: 99  DFSVI---DKTKLDPRFVTDYSVGSFYYSFVIGCNVDSVSA------CPKSWADLFDTAK 149
           D   +   DK     +     +V S  Y   +    + ++          SWA +FD  +
Sbjct: 110 DTGRLKNWDKLASAYKGAPQLTVDSSVYGVPLLAGFEGLARNTDYTKASDSWAIMFDQ-E 168

Query: 150 FPGKRTFYKWSAPGVIEAALLADGVTADKLY----PLDLDRAFKKLDTI---KSDII--W 200
           + G  ++        ++  +   G   D +     P +   A  K         D++  +
Sbjct: 169 YKGLTSYI---ISDFLQITMRYQGNDGDFVTYEGKPEEAQAATNKARDYLIQNKDMVRKY 225

Query: 201 WSGGAQSQQLIASAEAPFGSVWNGRMTALEQSGVKVETSWAQNITAA--DSLVVPKGTKN 258
           +  G++ QQ+  + +      W+G    L   G  +E S  +  T     S  V K   N
Sbjct: 226 YDAGSEVQQMFVNEDIYVAHSWSGPAAKLIMDGHPIEISVPKEGTYGFLYSFNVVKNGPN 285

Query: 259 KDAAMKFI-ALATSAQAQADMATATGYAPVNIESAKLMDPK--IAKSLPDQQTE-----S 310
            DAA  F+ A+ +S +  A M+  +G+A       K+++ K   A +LP +QTE     S
Sbjct: 286 TDAAYTFLDAILSSPEIGAAMSRQSGFASAFDGVDKVLNDKERAAMTLPQEQTERIQFFS 345

Query: 311 QVNADM 316
            VN DM
Sbjct: 346 SVNRDM 351