Pairwise Alignments

Query, 228 a.a., formyl-methanofuran dehydrogenase from Agrobacterium fabrum C58

Subject, 272 a.a., formylmethanofuran dehydrogenase subunit C from Methanococcus maripaludis S2

 Score = 72.8 bits (177), Expect = 6e-18
 Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 7/126 (5%)

Query: 53  VHGSVGYYCAGMNDGGTVTVHGSAGPGVAENMMSGTVVIEGDASQYAGATGR-------G 105
           V+G  G Y      GG +TV+G A   V +N+  G ++I G+A  Y G+  R       G
Sbjct: 87  VNGDAGMYIGVEMKGGKITVNGDAESWVGQNLKGGEIIINGNAENYVGSAYRGDWRGMSG 146

Query: 106 GLLVIKGNAASRCGISMKGIDIVVKGNIGHMSAFMGQSGHLVVCGDAGDALGDSLYEAKL 165
           G + I GNA S  G  +KG  IV+KGN   M       G +++ GD     G  + +  +
Sbjct: 147 GKITITGNAGSELGEYLKGGTIVIKGNTKIMPGIHQNGGMIIIEGDIEGRAGGEMMKGAI 206

Query: 166 FVRGSV 171
            V G +
Sbjct: 207 VVYGKI 212



 Score = 64.3 bits (155), Expect = 2e-15
 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 7/100 (7%)

Query: 80  VAENMMSGTVVIEGDASQYAGATGRGGLLVIKGNAASRCGISMKGIDIVVKGNIGHM--S 137
           + E M SG +V+ GDA  Y G   +GG + + G+A S  G ++KG +I++ GN  +   S
Sbjct: 76  IGEKMTSGEIVVNGDAGMYIGVEMKGGKITVNGDAESWVGQNLKGGEIIINGNAENYVGS 135

Query: 138 AFMG-----QSGHLVVCGDAGDALGDSLYEAKLFVRGSVK 172
           A+ G       G + + G+AG  LG+ L    + ++G+ K
Sbjct: 136 AYRGDWRGMSGGKITITGNAGSELGEYLKGGTIVIKGNTK 175



 Score = 33.5 bits (75), Expect = 4e-06
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 51  VDVHGSVGYYCAGMNDGGTVTVHGSAG--PGVAENMMSGTVVIEGDASQYAGATGRGGLL 108
           + + G+ G        GGT+ + G+    PG+ +N   G ++IEGD    AG     G +
Sbjct: 149 ITITGNAGSELGEYLKGGTIVIKGNTKIMPGIHQN--GGMIIIEGDIEGRAGGEMMKGAI 206

Query: 109 VIKG 112
           V+ G
Sbjct: 207 VVYG 210



 Score = 29.6 bits (65), Expect = 6e-05
 Identities = 16/57 (28%), Positives = 28/57 (49%)

Query: 117 RCGISMKGIDIVVKGNIGHMSAFMGQSGHLVVCGDAGDALGDSLYEAKLFVRGSVKS 173
           R G  M   +IVV G+ G       + G + V GDA   +G +L   ++ + G+ ++
Sbjct: 75  RIGEKMTSGEIVVNGDAGMYIGVEMKGGKITVNGDAESWVGQNLKGGEIIINGNAEN 131