Pairwise Alignments

Query, 228 a.a., formyl-methanofuran dehydrogenase from Agrobacterium fabrum C58

Subject, 312 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score = 49.3 bits (116), Expect = 8e-11
 Identities = 23/66 (34%), Positives = 41/66 (62%)

Query: 50  TVDVHGSVGYYCAGMNDGGTVTVHGSAGPGVAENMMSGTVVIEGDASQYAGATGRGGLLV 109
           TV V+G+ G     +  GGTV + G+ G   A +M+SGT++I+G+A ++ G+  + G++ 
Sbjct: 218 TVLVNGNAGKNTGSVLRGGTVIITGNTGDFTASDMISGTIIIDGNAGKFLGSKKKKGVIY 277

Query: 110 IKGNAA 115
            K  +A
Sbjct: 278 AKDGSA 283



 Score = 46.6 bits (109), Expect = 5e-10
 Identities = 23/73 (31%), Positives = 38/73 (52%)

Query: 62  AGMNDGGTVTVHGSAGPGVAENMMSGTVVIEGDASQYAGATGRGGLLVIKGNAASRCGIS 121
           A + +G  +TV+G+        M +GTV++ G+A +  G+  RGG ++I GN        
Sbjct: 192 ARLENGSKITVNGNVDLSTGILMKNGTVLVNGNAGKNTGSVLRGGTVIITGNTGDFTASD 251

Query: 122 MKGIDIVVKGNIG 134
           M    I++ GN G
Sbjct: 252 MISGTIIIDGNAG 264



 Score = 45.1 bits (105), Expect = 2e-09
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 1/119 (0%)

Query: 6   LSHTPLRELNSALHGLSSGVNDTEFEVVNPRG-HHAVAVGIDSPVTVDVHGSVGYYCAGM 64
           +S T L E NS    L   V      ++N       +   +++   + V+G+V      +
Sbjct: 154 ISITELMESNSQEKVLKPNVFKNNELILNDNVIRDTIGARLENGSKITVNGNVDLSTGIL 213

Query: 65  NDGGTVTVHGSAGPGVAENMMSGTVVIEGDASQYAGATGRGGLLVIKGNAASRCGISMK 123
              GTV V+G+AG      +  GTV+I G+   +  +    G ++I GNA    G   K
Sbjct: 214 MKNGTVLVNGNAGKNTGSVLRGGTVIITGNTGDFTASDMISGTIIIDGNAGKFLGSKKK 272



 Score = 43.5 bits (101), Expect = 5e-09
 Identities = 19/80 (23%), Positives = 40/80 (50%)

Query: 89  VVIEGDASQYAGATGRGGLLVIKGNAASRCGISMKGIDIVVKGNIGHMSAFMGQSGHLVV 148
           + + G+     G   + G +++ GNA    G  ++G  +++ GN G  +A    SG +++
Sbjct: 200 ITVNGNVDLSTGILMKNGTVLVNGNAGKNTGSVLRGGTVIITGNTGDFTASDMISGTIII 259

Query: 149 CGDAGDALGDSLYEAKLFVR 168
            G+AG  LG    +  ++ +
Sbjct: 260 DGNAGKFLGSKKKKGVIYAK 279



 Score = 37.4 bits (85), Expect = 3e-07
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 105 GGLLVIKGNAASRCGISMKGIDIVVKGNIGHMSAFMGQSGHLVVCGDAGDALGDSLYEAK 164
           G  + + GN     GI MK   ++V GN G  +  + + G +++ G+ GD     +    
Sbjct: 197 GSKITVNGNVDLSTGILMKNGTVLVNGNAGKNTGSVLRGGTVIITGNTGDFTASDMISGT 256

Query: 165 LFVRGSV-KSLGA 176
           + + G+  K LG+
Sbjct: 257 IIIDGNAGKFLGS 269



 Score = 23.5 bits (49), Expect = 0.005
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 12/76 (15%)

Query: 52  DVHGSVGYYCAG---MNDGGTVTVHGSAGPGVAENMMSGTVVIEGDASQYAGATGR--GG 106
           DV G + Y        N    V + G  G     +M +       D   + G+ G+   G
Sbjct: 52  DVSGGISYEKLVNHIKNPENVVYIKGDVGHRFCSSMGA-------DLKYFGGSGGKIQTG 104

Query: 107 LLVIKGNAASRCGISM 122
            +++ GN  +R GISM
Sbjct: 105 TVIVDGNIDTRFGISM 120