Pairwise Alignments

Query, 303 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 305 a.a., ABC-type sugar transport systems, permease components from Pseudomonas stutzeri RCH2

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 65/284 (22%), Positives = 126/284 (44%), Gaps = 10/284 (3%)

Query: 14  PLFYLAPAIALLVVFFLAPIAINAVIAFTDMGASLRVGEFTMRNFERIVQRDARIPMVLL 73
           P   LAP++ +++V F A I    +++FT+           ++ +ER+   D     V  
Sbjct: 24  PKLVLAPSMLIVLVGFYAYIGWTFLLSFTNSRFMPSYKWVGLQQYERLWDNDRW--WVAS 81

Query: 74  TTLIYVTATLFIFNVGLGALLAMTSTAIPDRLGNFFRGLWLLPRMSPAVLYGILWIWIAD 133
             L+         ++ +G +LA+       R G   R ++L P     ++ G  W W+ +
Sbjct: 82  QNLLVFGGLFIAVSLIIGVVLAVLLDQRIRREG-LIRTIYLYPMALSMIVTGTAWQWLLN 140

Query: 134 PSPSGLLNQITATLGLAPIN----LRNDFPLFLVILANGIVGASFAMVILTSAIRSIPSH 189
           P     L+++    G         +  D  ++ +++A     + F M +  + +RS+   
Sbjct: 141 PGLG--LDKLLRDWGWEGFRFDWLVDPDRVIYCLVIAAVWQASGFVMALFLAGLRSVDQS 198

Query: 190 LANAARVDGASEWGVLRHVVAPALSQPIRFITIYQALSLMTTYEYILLITGGGPVYDSTP 249
           +  AA+VDGAS   +   +V P+L        +  A   + +++ +  +T GGP Y S  
Sbjct: 199 IIRAAQVDGASLPTIYLRIVLPSLRPVFFSALMILAHIAIKSFDLVAAMTAGGPGYSSDL 258

Query: 250 YALYIYRRAFENGAYAYGAALALGLMVIGVAVTLVQWRVTNMRS 293
            A+++Y   F  G    GAA A+ LM+  V   +V +  + +R+
Sbjct: 259 PAMFMYAHTFTRGQMGLGAASAM-LMLGAVMAIIVPYLYSELRN 301