Pairwise Alignments

Query, 394 a.a., tetracycline resistance protein from Agrobacterium fabrum C58

Subject, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 84/361 (23%), Positives = 146/361 (40%), Gaps = 66/361 (18%)

Query: 59  PILGALSDRFGRRPVLLLSLAGTLLDYLVMAFSPLGWVLVVGRAMAGITSAN-MAVASAY 117
           P+ G L D++GR+P+L+++L+   L  ++ AF+     LV GR + G+ S   M+++ A 
Sbjct: 64  PVYGWLGDQYGRKPMLMIALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQAL 123

Query: 118 ITDITPAEQRAQRFGTVGAVMSLGFIIGPVIGGVIGAW-------WLRAPFLVAALFN-- 168
           I ++ P  +RA+  G   ++ ++  I GPV+GGV+  +       W   P +  AL+   
Sbjct: 124 IGELVPPRERARFQGYFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLA 183

Query: 169 ------------------GLNLF----------------------------VALFVLPES 182
                             GL LF                            V+ FVL   
Sbjct: 184 RFQFVQSSRKSEASIDVAGLILFPSMMTLIIYWLSAGGHYFPWFSVTSISLVSAFVLTSL 243

Query: 183 RKAGPGKFAFKELNPLAPLVWLWNFKPLL-PLVTVSVVFGLVAAIPGTIWVLYGAERFGW 241
                 K       PL  L       PLL   +  + +F L+  +P  I++  G      
Sbjct: 244 LFIAQQKRVTASFLPLRLLARREIHIPLLSTFIFAACLFALIFFLP--IFLQLGLRVNAA 301

Query: 242 DSVHMGLSLSVFGVSGALAQAFLVGPLSRRFGDLGTL-MIGVGFDMLAYMLMA-FANQSW 299
            S  + + LS     G +  A+  G +  + G    L + G+     A+ ++A F+  + 
Sbjct: 302 QSGLLLIPLS----CGIIGGAYTTGKVIAKTGVPKFLPVFGMSLSSCAFAVLAMFSLSAP 357

Query: 300 MGYAVAPLFALG-GVAMPALQSLVTSRVSDDQQGQLQGVLASLMSLAGIIGPVLTTAVFF 358
           +  A+A L  LG G  MP+ Q LV +       G++  + +   SL   +G      + +
Sbjct: 358 VVSAIAALCGLGLGTVMPSTQVLVQTLAGKANLGRITAMASLSRSLGASVGTAFFGTLIY 417

Query: 359 S 359
           S
Sbjct: 418 S 418



 Score = 45.1 bits (105), Expect = 4e-09
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 18/180 (10%)

Query: 207 FKPLLPLVTVSVVFGLVA-AIPGTIWVLYGAERFGWDSVHMGLSLSVFGVSGALAQAFLV 265
           F   LP+   +V   L+A A P  +  L   +   W ++   L+        + A   + 
Sbjct: 15  FTVFLPMFLAAVDQTLLATATPAIVRDLGNLQLSSWIAIGYMLA--------SAASVPVY 66

Query: 266 GPLSRRFGDLGTLMIGVGFDMLAYMLMAFA-NQSWMGYAVAPLFALG---GVAMPALQSL 321
           G L  ++G    LMI +    L  ++ AFA N  W+   VA     G   G  M   Q+L
Sbjct: 67  GWLGDQYGRKPMLMIALSIFALGSVICAFAMNMPWL---VAGRIVQGLGSGGLMSLSQAL 123

Query: 322 VTSRVSDDQQGQLQGVLASLMSLAGIIGPVL--TTAVFFSTKSIWIGTIWLVGAALYLLA 379
           +   V   ++ + QG  +SL ++A I GPVL      + S + ++   + LVG ALY LA
Sbjct: 124 IGELVPPRERARFQGYFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLA 183