Pairwise Alignments

Query, 395 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 404 a.a., starvation-sensing protein RspA from Klebsiella michiganensis M5al

 Score =  126 bits (316), Expect = 1e-33
 Identities = 118/419 (28%), Positives = 188/419 (44%), Gaps = 47/419 (11%)

Query: 1   MKIDRMRVFVTRDKDRPRVIVALDTDDGMTGWGECYNHGPDLALPPVL-DYLYNFLAGQD 59
           MKI    VFVT    R  V + + TDDG+ G G+   +G +L++   L D+L   L G+D
Sbjct: 1   MKIVAAEVFVTCP-GRNFVTLKVTTDDGIVGLGDATLNGRELSVASYLRDHLCPQLIGRD 59

Query: 60  PTRVEFLYNLMLQQNRFPPGALGLSAISALDHCLWDLAAKAVGVPVYKLLGGEVRNRIKV 119
             R+E ++    +   +  G + +SAISA+D  LWD+ AKA G+P+Y+LLGG  R  + V
Sbjct: 60  AHRIEDIWQFFYKGAYWRRGPVTMSAISAIDMALWDIKAKAAGMPLYQLLGGASREGVMV 119

Query: 120 YAGVYTAPDAPAARDEFDRLNEGWGFSAFKLS---PWRVDIHAHRWG------------- 163
           Y    T        D++ R  E  GF A ++    P     +    G             
Sbjct: 120 YCHT-TGHSIDEVLDDYARHKE-MGFKAIRVQCGVPGMKTTYGMAKGKGQAYEPATKGQW 177

Query: 164 --EVVRSSAEY-------FRTLRETVRADYDIAFDAHAKIFEPSAARQLGNALAPYDPLF 214
             E + S+ +Y       F  +RE    +  +  D H ++  P  A + G ++  Y   +
Sbjct: 178 PEEQLWSTEKYLDFTPQLFAAVREKFGFNEHLLHDMHHRL-TPIEAARFGKSIEDYRLFW 236

Query: 215 YEEPLRPENIEMYGDLKQGLNCTLATGESLYNRNEFLRLLQVKGADIIQPDICVVGGISE 274
            E+P   EN E +  ++Q     +A GE   +  +  +L++ +  D I+  I   GGI+ 
Sbjct: 237 MEDPTPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTITHAGGITG 296

Query: 275 MRRIATLAEAHFVSIAPHNP--MGPLATAVNVHFCAVQQNFRILEYRLPKGQVYAYGGND 332
           MRRIA  A  + V    H P  + P+  A  +HF     NF + EY          G ++
Sbjct: 297 MRRIADFASLYQVRTGSHGPSDLSPVCMAAALHFDLWVPNFGVQEY---------MGYSE 347

Query: 333 LVKEEDVTRYVVDPYLPRDGYLELRPDRPGWGVEMDEKAMQEDGYVHWQRRVPKRPDGS 391
            + E     +  D     +GY+    ++PG G+E DEK   +  Y      V +  DG+
Sbjct: 348 QMLEVFPHSWTFD-----NGYMH-PGEKPGLGIEFDEKLAAKYPYEPAYLPVARLEDGT 400