Pairwise Alignments

Query, 649 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 81.3 bits (199), Expect = 1e-19
 Identities = 96/405 (23%), Positives = 163/405 (40%), Gaps = 80/405 (19%)

Query: 115 NLAEKWEVSPDASEFTFHL-----IEGAKW-SDGHPFTADDVVFAIEDCIKNKELYSATP 168
           +LA  W V+    E+ F L      +   W S   P  ADDVVF+    I     Y    
Sbjct: 80  SLASSWTVNSTGLEYVFKLRPDVAFQTTPWFSPTRPLNADDVVFSFRRIIDPTNPYHKVG 139

Query: 169 AQ-------LSVAGKAVDVSKVDDFTVKFKFAAPNALYLENLATPLGQHPTLFPKHYCSK 221
                    +      VDVS +DD TVKF  + P+  +L N+AT    H  +    Y ++
Sbjct: 140 QTQYPWFKGIDFQNLLVDVSALDDLTVKFVLSRPDNSFLSNIAT---SHAVILSLEYANQ 196

Query: 222 FLPKYNAALDAEVKAAGVSSWTELFRAKCGDIEIPSRWSNVDKPTLDPWVVKEPYSGGAT 281
            +      +D E             + K  ++ + +           P+ + E +     
Sbjct: 197 LI------IDDE-------------KEKLDNLPLGT----------GPFYLAEYHPRDLI 227

Query: 282 RVVMTRNPYFWQVDTDGNQLPYINEINFGISQDVESLMLNVISGKIDIQERHISVLANKP 341
           R  + R+P +W+          + ++ F ISQ    ++  ++  + D+    IS  +  P
Sbjct: 228 R--LKRHPQYWEGAAK------VEQVVFDISQRGTGMLAKLLRNECDVLNAPIS--SQLP 277

Query: 342 TLSQNMEKGNYRLMTLVPSAAQQCQIYLNITHKDPAMRKMFADKSFRQALSLGLNRQEII 401
            + +N +     ++     A     I +N  H  PA+     D   R+AL+  +NRQ I+
Sbjct: 278 AIEKNPD-----IVLQTTPAMNVAFIAVNTQH--PALN----DNRVRKALNFAINRQNIL 326

Query: 402 EIVYFGQSEAYQTGPRPTHPWYHEKLARQSTEFDADKANELLDKAGYDKKNGNGIRLRPD 461
           + VY+G      T   PT   Y +  A+    +D + A  LL +AG+             
Sbjct: 327 DSVYYGTGSIAFTILPPTSWAYQQDTAQ--IRYDRNYAQALLREAGF-----------AT 373

Query: 462 GQPIFFSIDVIPTLY-PDLVDTLELVKAQWAQIGVDIKVNTIERA 505
           G  +  S+ V P  Y P    T EL++A  A IGV +++ + +R+
Sbjct: 374 GLELTMSVPVEPKAYNPSPRKTAELIQANLADIGVTLRLISEDRS 418