Pairwise Alignments

Query, 874 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

Subject, 854 a.a., ATP-dependent chaperone ClpB from Pseudomonas stutzeri RCH2

 Score =  976 bits (2522), Expect = 0.0
 Identities = 502/857 (58%), Positives = 646/857 (75%), Gaps = 4/857 (0%)

Query: 1   MNIDKYSERVRGFLQSAQTFALAENHQQFSPEHVLKVLLDDEQGMAASLIERAGGDAKEA 60
           M ID+ + +++  L  AQ+ A+  +H    P H+++ LL+ + G    L+ + G D    
Sbjct: 1   MRIDRLTSKLQLALSDAQSIAVGLDHPAIEPLHLMQALLEQQGGSIKPLLMQVGFDIAAL 60

Query: 61  RLANDAALAKLPKVSGGNGGLSLTAPLAKVFSTAEDLAKKAGDSFVTVERLLQALAIESS 120
           R A    L +LPK+    G ++L+  LA++ + A+ LA++ GD +++ E +L A A++S+
Sbjct: 61  RQALTKELDQLPKLQNPTGDMNLSQDLARLLNQADRLAQQKGDQYISSELVLLA-ALDSN 119

Query: 121 ASTSASLKKAGATAQALNQVINDIRKGRTADSANAEQGFDALKKYARDLTEEAREGRLDP 180
                 L   G + +AL   IN++R G   +  NAE+   AL KY  D+T+ A +G+LDP
Sbjct: 120 TRLGKLLLAQGVSKKALENAINNLRGGDAVNDPNAEESRQALDKYTVDMTKRAEDGKLDP 179

Query: 181 VIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKKLMA 240
           VIGRDDEIRRTIQVL RRTKNNPVLIGEPGVGKTAI EGLA RIVNG+VP+ LKDK+L+A
Sbjct: 180 VIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLA 239

Query: 241 LDMGALIAGAKYRGEFEERLKAVLNEVQAENGGIILFIDEMHTLVGAGKADGAMDASNLL 300
           LDMG+LIAGAK+RGEFEERLKAVLN++  + G +ILFIDE+HT+VGAGKA+GAMDA N+L
Sbjct: 240 LDMGSLIAGAKFRGEFEERLKAVLNDLSKQEGRVILFIDELHTMVGAGKAEGAMDAGNML 299

Query: 301 KPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVLVDEPNVEDTISILRGLKEKYEQ 360
           KPALARGELHCVGATTLDEYR+++EKD AL RRFQ VLVDEP+ EDTI+ILRGLKE+YE 
Sbjct: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEV 359

Query: 361 HHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRI 420
           HH V I+D A++AAA LS+RYITDR LPDKAIDL+DEAASR+RM++DSKPEELD LDRR+
Sbjct: 360 HHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRL 419

Query: 421 IQLKIEREALKQETDQSSVDRLRKLEDELADTEEKADALTARWQAEKQKLGHAADLKKRL 480
           IQLKIEREALK+E D+++  RL KLED++A    +   L   W++EK ++  +A +++++
Sbjct: 420 IQLKIEREALKKEDDEATKKRLAKLEDDIAKLAREYADLEEIWKSEKAEVQGSAQIQQKI 479

Query: 481 DEARNELAIAQRNGQFQRAGELTYGIIPGLEKELAAAEARDSSGAGSMVQEVVTPDNIAH 540
           ++A+ EL  A+R G   R  EL YGIIP LE+ L   + +       +++  VT + IA 
Sbjct: 480 EQAKAELEAARRKGDLARMAELQYGIIPDLERSLEMVD-QHGKKENQLLRNKVTDEEIAE 538

Query: 541 VVSRWTGIPVDKMLEGQREKLLRMEDELAKSVVGQGEAVQAVSKAVRRSRAGLQDPNRPI 600
           VVS+WTGIPV KMLEG+R+KLLRMED L   V+GQ EAV AVS AVRRSRAGL DPNRP 
Sbjct: 539 VVSKWTGIPVSKMLEGERDKLLRMEDMLHTRVIGQHEAVVAVSNAVRRSRAGLADPNRPS 598

Query: 601 GSFIFLGPTGVGKTELTKSLARFLFDDETAMVRLDMSEYMEKHSVARLIGAPPGYVGYEE 660
           GSF+FLGPTGVGKTEL K+LA FLFD E AM+R+DMSE+MEKHSVARLIGAPPGYVGYEE
Sbjct: 599 GSFLFLGPTGVGKTELCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEE 658

Query: 661 GGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIIMTS 720
           GG LTEAVRR+PY VVL DE+EKAHPDVFNVLLQVL+DGRLTD  GRTVDFKNT+I+MTS
Sbjct: 659 GGYLTEAVRRKPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTS 718

Query: 721 NLGSEFMTQMGDNDDVDSVRELVMERVRSHFRPEFLNRIDDIILFHRLRRDEMGAIVEIQ 780
           NLGS  + ++    D  + R  VM+ V  HFRPEF+NRID++++F  L R+++  I +IQ
Sbjct: 719 NLGSTQIQEL--VGDPGAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLGREQIAGIADIQ 776

Query: 781 LKRLVSLLADRKITLELDEDARSWLANKGYDPAYGARPLKRVIQKSVQDRLAEMILGGEI 840
           L RL   LA+R+++LEL ++A   L   GYDP YGARPLKR IQ+ +++ LA+ IL G+ 
Sbjct: 777 LGRLRKRLAERELSLELSQEAMDKLIAVGYDPVYGARPLKRAIQRWIENPLAQQILSGQF 836

Query: 841 PDGSRVKVTSGTDRLLF 857
             GS VK     ++++F
Sbjct: 837 APGSSVKARVEGEQIVF 853