Pairwise Alignments

Query, 874 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

Subject, 899 a.a., chaperone protein ClpB from Phaeobacter inhibens DSM 17395

 Score = 1152 bits (2981), Expect = 0.0
 Identities = 583/856 (68%), Positives = 709/856 (82%), Gaps = 3/856 (0%)

Query: 1   MNIDKYSERVRGFLQSAQTFALAENHQQFSPEHVLKVLLDDEQGMAASLIERAGGDAKEA 60
           M+++K++ER RGF+Q+AQT A  E+HQ+  PEH+LK L+DD+QG+A++LI RAGG  ++ 
Sbjct: 28  MDLNKFTERARGFVQAAQTIARREDHQRLMPEHLLKALMDDDQGLASNLITRAGGTPEQV 87

Query: 61  RLANDAALAKLPKVSGGNGGLSLTAPLAKVFSTAEDLAKKAGDSFVTVERLLQALAIESS 120
             A + A++KLP+V G +  + L    AKV   A  +A+KAGDSFV VERLL AL +  S
Sbjct: 88  VQALELAVSKLPRVQGNSADIYLDGQTAKVLDEAAKIAEKAGDSFVPVERLLMALCMVKS 147

Query: 121 ASTSASLKKAGATAQALNQVINDIRKGRTADSANAEQGFDALKKYARDLTEEAREGRLDP 180
            +  A L     +AQALN+ +NDIRKGR ADSA+AE G+DALKKYARDLTE  R+G++DP
Sbjct: 148 KAKDA-LADGNVSAQALNEAVNDIRKGRKADSASAEDGYDALKKYARDLTEAVRDGKIDP 206

Query: 181 VIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKKLMA 240
           +IGRD+EIRR +QVLSRRTKNNPVLIGEPGVGKTAIAEG+ALRIVNGDVPESL+DK+L++
Sbjct: 207 IIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGMALRIVNGDVPESLRDKQLLS 266

Query: 241 LDMGALIAGAKYRGEFEERLKAVLNEVQAENGGIILFIDEMHTLVGAGKADGAMDASNLL 300
           LDMGALIAGAKYRGEFEERLKAVL EV    G IILFIDEMHTLVGAGK+DGAMDA+NL+
Sbjct: 267 LDMGALIAGAKYRGEFEERLKAVLTEVTEAAGEIILFIDEMHTLVGAGKSDGAMDAANLI 326

Query: 301 KPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVLVDEPNVEDTISILRGLKEKYEQ 360
           KPALARGELHC+GATTLDEYRK+VEKD ALARRFQPV+V EP VEDTISILRG+KEKYE 
Sbjct: 327 KPALARGELHCIGATTLDEYRKYVEKDAALARRFQPVMVTEPTVEDTISILRGIKEKYEL 386

Query: 361 HHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRI 420
           HH VRI+D+ALV+AATLS+RYITDRFLPDKAIDLMDEAA+RLRMQVDSKPEELD LDR+I
Sbjct: 387 HHGVRIADAALVSAATLSHRYITDRFLPDKAIDLMDEAAARLRMQVDSKPEELDALDRQI 446

Query: 421 IQLKIEREALKQETDQSSVDRLRKLEDELADTEEKADALTARWQAEKQKLGHAADLKKRL 480
           +Q++IE EALK E D +S DRL  L+ ELA+ +EK+  +TA+WQ+E+ KL  A  LK++L
Sbjct: 447 LQMQIEEEALKLEDDAASKDRLETLQKELAELQEKSAEMTAQWQSERDKLASARGLKEQL 506

Query: 481 DEARNELAIAQRNGQFQRAGELTYGIIPGLEKELAAAEARDSSGAGSMVQEVVTPDNIAH 540
           D AR +L  A+R G   RAGEL+YG+IPGLEK+L+ AEA + +G   MV+E V P+ IA 
Sbjct: 507 DRARADLDAAKREGNLARAGELSYGVIPGLEKQLSEAEASERNGL--MVEEAVRPEQIAG 564

Query: 541 VVSRWTGIPVDKMLEGQREKLLRMEDELAKSVVGQGEAVQAVSKAVRRSRAGLQDPNRPI 600
           VV RWTGIP  KMLEG+REKLLRME +L   V+GQ  AV AVS AVRR+RAGL D NRP+
Sbjct: 565 VVERWTGIPTSKMLEGEREKLLRMEADLHGRVIGQDAAVTAVSNAVRRARAGLNDENRPL 624

Query: 601 GSFIFLGPTGVGKTELTKSLARFLFDDETAMVRLDMSEYMEKHSVARLIGAPPGYVGYEE 660
           GSF+FLGPTGVGKTELTK++A FLFDD++AMVR+DMSE+MEKH+VARLIGAPPGYVGY+E
Sbjct: 625 GSFLFLGPTGVGKTELTKAVADFLFDDDSAMVRVDMSEFMEKHAVARLIGAPPGYVGYDE 684

Query: 661 GGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIIMTS 720
           GG LTEAVRR+PYQV+LFDE+EKAHPDVFNVLLQVLDDG LTDGQGRTVDFK T+II+TS
Sbjct: 685 GGVLTEAVRRKPYQVILFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIILTS 744

Query: 721 NLGSEFMTQMGDNDDVDSVRELVMERVRSHFRPEFLNRIDDIILFHRLRRDEMGAIVEIQ 780
           NLG++ ++Q+ D  D    +  VM+ VR+HFRPEFLNR+D+ I+F RL R +M  IV +Q
Sbjct: 745 NLGAQALSQLPDGADAADAKRDVMDAVRAHFRPEFLNRLDETIIFDRLGRKDMDGIVTLQ 804

Query: 781 LKRLVSLLADRKITLELDEDARSWLANKGYDPAYGARPLKRVIQKSVQDRLAEMILGGEI 840
           L RL   L  RKITLELD+ A++WLA++GYDP +GARPLKRVIQ+ +Q+ LAEM+L GEI
Sbjct: 805 LARLEKRLVGRKITLELDDGAKTWLADEGYDPVFGARPLKRVIQRVLQNPLAEMLLAGEI 864

Query: 841 PDGSRVKVTSGTDRLL 856
            DG  V V++G + L+
Sbjct: 865 RDGDTVPVSAGAEGLI 880