Pairwise Alignments

Query, 360 a.a., peptide chain release factor 1 from Agrobacterium fabrum C58

Subject, 354 a.a., Peptide chain release factor 1 (NCBI) from Rhodospirillum rubrum S1H

 Score =  388 bits (996), Expect = e-112
 Identities = 203/353 (57%), Positives = 263/353 (74%), Gaps = 7/353 (1%)

Query: 7   EKMRELERRFGEIEARMSAGPAA-DVYVKLASEYSELEPVVKKIRDYEKAISEAADLEAL 65
           E +  +  R  E+ A +S      + +V+++ E ++L PVV+ I   + A +E A   AL
Sbjct: 5   ENLSRVVARHDELRALLSTSAGGGEGFVRMSRELADLAPVVEAIGRLDDAKAELAGARAL 64

Query: 66  LADKTTDKDMRDLAEMELPEVETRIRELEKDMQVLLLPKDAADEKSAILEIRAGTGGSEA 125
           L     D DMRDLA  E+  +E  I  LE  +++LLLP+D AD++  ILE+RAGTGG EA
Sbjct: 65  L----DDPDMRDLAREEVLRLEAEIPALEHGVKLLLLPRDEADDRGVILEVRAGTGGDEA 120

Query: 126 ALFAGDLFRMYERFAATKGWKVEVLSASEGEAGGYKEIIATITGRGVFSKLKFESGVHRV 185
           ALFAGDL RMYER+A  +GW+ EV+ AS+ + GG KE  A I+GRGVF++LKFESGVHRV
Sbjct: 121 ALFAGDLLRMYERYAQERGWRFEVMEASDTDIGGIKEASAAISGRGVFARLKFESGVHRV 180

Query: 186 QRVPETEASGRIHTSAATVAVLPEAEDIDVEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245
           QRVP TE  GRIHTSAATVAVLPEAE++DVEI  +D+RIDT R+ GAGGQHVNTTDSAVR
Sbjct: 181 QRVPVTEGGGRIHTSAATVAVLPEAEEVDVEIEEKDLRIDTYRSQGAGGQHVNTTDSAVR 240

Query: 246 ITHLPTGLIV-TSSEKSQHQNRAKAMQVLRSRLYDIERQKVDSERSADRKSQVGSGDRSE 304
           ITHLP+G++     EKSQH+N+AKAM++LR++LYD  RQ  D  R+  R+ QVGSGDRSE
Sbjct: 241 ITHLPSGVVAQCQDEKSQHKNKAKAMRMLRTKLYDHARQTADDARAEARRVQVGSGDRSE 300

Query: 305 RIRTYNFPQGRVTDHRINLTLYKLDRVIEG-EIDELVDALIADYQAGQLAQLG 356
           RIRTYNFPQGRVTDHRI LTL++L  V+ G  +DE+++ LIA+ QA ++A++G
Sbjct: 301 RIRTYNFPQGRVTDHRIGLTLHRLPEVLAGTALDEVIEPLIAEDQATRMAEIG 353