Pairwise Alignments

Query, 615 a.a., cold-shock dead-box protein A from Agrobacterium fabrum C58

Subject, 460 a.a., ATP-dependent RNA helicase DbpA from Vibrio cholerae E7946 ATCC 55056

 Score =  234 bits (598), Expect = 5e-66
 Identities = 129/339 (38%), Positives = 200/339 (58%), Gaps = 7/339 (2%)

Query: 7   IAPAIAQALEKRGYKDLTPVQQAMLAPELANKDALVSAQTGSGKTVAFGIALATTLLSEN 66
           + P +   LE  G+  +TP+Q   L   L  +D +   +TGSGKT AFG+ + + L  + 
Sbjct: 11  LKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLSNLNVKR 70

Query: 67  TRFGQASAPLALAIAPTRELAMQVKRELEWLYE-FAGVSIASCVGGMDIRNERRALERGA 125
            R        AL + PTRELA QV  ++  L      + + +  GGM +  +  +LE GA
Sbjct: 71  FRVQ------ALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEHGA 124

Query: 126 HIVVGTPGRLCDHIKRNALDLSSIRAVVLDEADEMLDLGFREDLEFILEESPDDRRTLMF 185
           HI+VGTPGR+ DH+ ++ +DLS +  +VLDEAD ML++GF+E LE I+  +P +R+TL+F
Sbjct: 125 HILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQTLLF 184

Query: 186 SATVPRSIAKLAESYQKNAVRIATASEQKQHVDIEYRALLVSPSDRENAIINALRFYEAR 245
           SAT P SI ++A+S  +NA+ I   +        +Y   +   + R+ A+   L  ++  
Sbjct: 185 SATYPASIEQIAQSVTRNALMIKVEATHDTSSIRQYFYKVEGSAARDEALETLLLHHQPT 244

Query: 246 NAIVFCSTRAAVNHLTARLNNRGFSVVALSGELTQNERTHALQAMRDGRARVCVATDVAA 305
           +++VFC+T+  V ++   L+  GFSV+ L G++ Q ER  AL    +    + VATDVAA
Sbjct: 245 SSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDVAA 304

Query: 306 RGIDLPGLELVIHADLPTNSETLLHRSGRTGRAGQKGVS 344
           RG+D+  L+ V + DL  + E  +HR GRTGRAG KG++
Sbjct: 305 RGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLA 343