Pairwise Alignments

Query, 615 a.a., cold-shock dead-box protein A from Agrobacterium fabrum C58

Subject, 503 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  221 bits (562), Expect = 8e-62
 Identities = 138/373 (36%), Positives = 206/373 (55%), Gaps = 6/373 (1%)

Query: 6   GIAPAIAQALEKRGYKDLTPVQQAMLAPELANKDALVSAQTGSGKTVAFGIALATTLLSE 65
           G++  I   L   G++  TP+Q   +   L + D +  AQTG+GKT AFG+ +   L+++
Sbjct: 8   GLSEHIVATLSANGFEKPTPIQAQAIPLVLKDHDLIGLAQTGTGKTAAFGLPMIEKLVAD 67

Query: 66  NTRFGQASAPLALAIAPTRELAMQVKRELEWLYEFAGVSIASCVGGMDIRNERRALERGA 125
             R    +   AL +APTREL  Q+   L+   + + + I   VGG+ I  +   L RG 
Sbjct: 68  GRRPDPRNIR-ALVLAPTRELVNQIAANLKLFVKKSPLKIGLVVGGVSINKQTEQLARGV 126

Query: 126 HIVVGTPGRLCDHIKRNALDLSSIRAVVLDEADEMLDLGFREDLEFILEESPDDRRTLMF 185
            I+V TPGRL D + R A+ L+  R +VLDEAD+MLDLGF  DL  I +  P +R+TL+F
Sbjct: 127 DILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLVPKNRQTLLF 186

Query: 186 SATVPRSIAKLAESYQKNAVRIATASEQKQHVDIEYRALLVSPSDRENAII-NALRFYEA 244
           SAT+P+ IA+LA  Y  + V++  +   K    +E     V   D +  I+   L     
Sbjct: 187 SATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVPGKDLKTTILKQTLTANPD 246

Query: 245 RNAIVFCSTRAAVNHLTARLNNRGFSVVALSGELTQNERTHALQAMRDGRARVCVATDVA 304
             +++F  T+     L   L++ GF   ++ G  +Q +R  AL+A RDG  RV VATDVA
Sbjct: 247 GLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVLVATDVA 306

Query: 305 ARGIDLPGLELVIHADLPTNSETLLHRSGRTGRAGQKGVS-AIVVPVSQR--RKAERLLE 361
           ARGID+PG+  V + DLP   +  +HR GRT R G+ G++ A   P   R  R  E+L+ 
Sbjct: 307 ARGIDIPGVTHVYNYDLPEVPDAYVHRIGRTARNGRDGIAIAFCAPDEIRLLRDIEKLM- 365

Query: 362 GAKVSAAWVRPPS 374
           G +++ A    P+
Sbjct: 366 GIQIAVASGEAPA 378