Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  162 bits (409), Expect = 1e-44
 Identities = 105/297 (35%), Positives = 165/297 (55%), Gaps = 19/297 (6%)

Query: 6   RLVPDIITLQAFECAARHGNFTRAAEELNLTQSAVSRQIGELEAQTGMQLFERIRRRVVL 65
           R +P + +L+ FE AARH +FTRAAEEL +TQ+AVS QI  LE   G++LF R  R ++L
Sbjct: 3   RRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLL 62

Query: 66  SEAGRKFLPDVR----RLLQQSEQLMVRAVSAGTSHASLSVATLPTFGSRWLMPRLSRFI 121
           +E G+ +  D++     L + +++L+ R     +   +L+++  P+F  +WL+PRL+ F 
Sbjct: 63  TEEGQSYFLDIKDIFSSLAEATDKLLER-----SEKGALTISLPPSFAIQWLVPRLADFN 117

Query: 122 DANPDMTITIGSRSHPFDFDE----EGFDLAIHYGQPIWAHGTCTFLCNEVIVPVASPA- 176
              PD+ + I +     D DE    +  D+AI+YG+  W       L  E ++P+ SPA 
Sbjct: 118 QQEPDIDVRIKA----VDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPAL 173

Query: 177 LLRRAGVNRAQDLAGQPLLHVTTRPKLWTEWLEMNGVTADNAYQGSRFDQFSMIIEAAAS 236
           LL    + +  DLA   LLH T+R K W ++ + NG+   N   G  F   +M+++AAA 
Sbjct: 174 LLGNKPMEKLSDLAYHTLLHDTSR-KDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAH 232

Query: 237 GIGFALLPRYLIEAELASSRLEIVFDIPLQTDKSYYVALPEGRQDNVLARAFQAWLL 293
           G G AL    L + E+ + RL   FD  L T+ ++YV   E + D      F+ W+L
Sbjct: 233 GQGVALGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWML 289