Pairwise Alignments

Query, 279 a.a., dipeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  240 bits (612), Expect = 6e-68
 Identities = 123/260 (47%), Positives = 175/260 (67%), Gaps = 1/260 (0%)

Query: 3   LLKIKNLTVKFATATGAFTAVDGIDVSVDKHEVLAIVGESGSGKSVSMLAVMGLLPDTAT 62
           LL+++NL+V F T  G   AV  +   +   E LAIVGESGSGKSVS  A+M LLP  A 
Sbjct: 6   LLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNAR 65

Query: 63  ITADE-MTFDGKNLLNMSSQERRRVIGREITMIFQEPVASLNPSFTVGFQIEEVLRLNLG 121
           I  +  + F+G+ LLN +  + RR+ G  I MIFQEP+ SLNP   VG Q+ E +R +  
Sbjct: 66  IHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHRN 125

Query: 122 MSGAAARARALELFQAVGIPEPETKLKAYPHQMSGGQCQRVMIAIAIASKPRLLIADEPT 181
           +S   A+ R LELFQ V +P+P+   + +PH+ SGGQ QR+MIA+A+ ++P +LIADEPT
Sbjct: 126 VSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEPT 185

Query: 182 TALDVTIQKQILDLLMKLQEEYGMALILITHDMGVVAETADRVVVQYKGRKMEEADVLSL 241
           TALDVT+Q ++L L+ ++Q   GMA++ ITHD+GVV   ADRV+V  KG  +E+     L
Sbjct: 186 TALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQL 245

Query: 242 FEAPQHPYTKALLSALPENA 261
           F  P+H YT+ L++++P+ +
Sbjct: 246 FLQPEHDYTRMLINSIPKGS 265



 Score =  164 bits (415), Expect = 4e-45
 Identities = 104/271 (38%), Positives = 159/271 (58%), Gaps = 20/271 (7%)

Query: 3   LLKIKNLTVKF-------ATATGAFTAVDGIDVSVDKHEVLAIVGESGSGKSVSMLAVMG 55
           LLK +++ VKF       +     F AV GI + + + E L IVGESGSGKS    A++G
Sbjct: 276 LLKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGRALIG 335

Query: 56  LLPDTATITADEMTFDGKNLLNMSSQERRRVIGREITMIFQEPVASLNPSFTVGFQIEEV 115
           LLP T  I      F G++   +S +++R  + ++I M+FQ+P  SL+P  TVG  I E 
Sbjct: 336 LLPSTGQIA-----FKGQDFRALS-EKQRLALKKDIQMVFQDPYGSLSPRMTVGEIITEG 389

Query: 116 LRLNLG-MSGAAARARALELFQAVGIPEPETKLKAYPHQMSGGQCQRVMIAIAIASKPRL 174
           L ++   +S      RA    + V + +P + +  YPH+ SGGQ QR+ IA A+  +P  
Sbjct: 390 LLVHQPHISKLERMQRARRALEEVRL-DPNS-INRYPHEFSGGQRQRIAIARALILEPSF 447

Query: 175 LIADEPTTALDVTIQKQILDLLMKLQEEYGMALILITHDMGVVAETADRVVVQYKGRKME 234
           ++ DEPT+ALD ++Q  +++LL ++Q+   +  + I+HD+ VV   +DRV+V  KG+ ME
Sbjct: 448 ILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQVME 507

Query: 235 EADVLSLFEAPQHPYTKALLSA----LPENA 261
           +    S+F  PQH YTK L++A    L ENA
Sbjct: 508 QGSAESIFHNPQHEYTKKLIAASFDILEENA 538