Pairwise Alignments

Query, 279 a.a., dipeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  241 bits (616), Expect = 2e-68
 Identities = 125/271 (46%), Positives = 178/271 (65%), Gaps = 1/271 (0%)

Query: 1   MSLLKIKNLTVKFATATGAFTAVDGIDVSVDKHEVLAIVGESGSGKSVSMLAVMGLLPDT 60
           MSLL++KNL +++ +  G   AV  + + + + E++ +VGESG+GKS    AV+ LL   
Sbjct: 1   MSLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPP 60

Query: 61  ATITADEMTFDGKNLLNMSSQERRRVIGREITMIFQEPVASLNPSFTVGFQIEEVLRLNL 120
            TI   E+  +G+ +  +S Q  R V G +I  IFQ+P+ SLNP FTV  Q+ E +  N+
Sbjct: 61  GTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANM 120

Query: 121 GMSGAAARARALELFQAVGIPEPETKLKAYPHQMSGGQCQRVMIAIAIASKPRLLIADEP 180
            +S   A  RAL L + VGIP+PE +LK YPHQ SGG  QRV+IAIA+A +P L+IADEP
Sbjct: 121 QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEP 180

Query: 181 TTALDVTIQKQILDLLMKLQEEYGMALILITHDMGVVAETADRVVVQYKGRKMEEADVLS 240
           TTALDV+IQ QIL+L+ +L ++  +  +L+THDMGVV+   DRV V Y+G  +E      
Sbjct: 181 TTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK 240

Query: 241 LFEAPQHPYTKALLSALPENATG-DRLPTVS 270
           +   P+HPYT++L+SA+P +    DR P VS
Sbjct: 241 VLGTPEHPYTRSLISAVPRSDRKLDRFPLVS 271



 Score =  177 bits (448), Expect = 6e-49
 Identities = 105/265 (39%), Positives = 155/265 (58%), Gaps = 14/265 (5%)

Query: 3   LLKIKNLTVKFATATGAFT-------AVDGIDVSVDKHEVLAIVGESGSGKSVSMLAVMG 55
           LLK++N+ ++F T    F        A + +  +V + E   +VGESGSGKS     + G
Sbjct: 302 LLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAG 361

Query: 56  LLPDTATITADEMTFDGKNLLNMSSQERRRVIGREITMIFQEPVASLNPSFTVGFQIEEV 115
           L    A      +TF+G +L  + S+  RR + R++ M+FQ P  S+NP   +   I E 
Sbjct: 362 LYQPNA----GRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEP 417

Query: 116 LRLN-LGMSGAAARARALELFQAVGIPEPETKLKAYPHQMSGGQCQRVMIAIAIASKPRL 174
           +R + L  S +  R    +L + VG+ +    LK YPH+ SGGQ QR+ IA A+A++PRL
Sbjct: 418 IRFHKLTRSESETRQIVNDLLEHVGLGKM-AGLK-YPHEFSGGQRQRISIARALATRPRL 475

Query: 175 LIADEPTTALDVTIQKQILDLLMKLQEEYGMALILITHDMGVVAETADRVVVQYKGRKME 234
           LI DEPT+ALDV++Q QIL+LL  LQ+E  + ++ I+HD+ V+ +  DRV V   G  +E
Sbjct: 476 LICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLE 535

Query: 235 EADVLSLFEAPQHPYTKALLSALPE 259
            A    LF  PQH Y+K L+S +PE
Sbjct: 536 VAPTEQLFTDPQHEYSKKLISLMPE 560