Pairwise Alignments

Query, 566 a.a., 30S ribosomal protein S1 from Agrobacterium fabrum C58

Subject, 555 a.a., 30S ribosomal protein S1 (RefSeq) from Shewanella loihica PV-4

 Score =  536 bits (1382), Expect = e-157
 Identities = 258/545 (47%), Positives = 379/545 (69%), Gaps = 8/545 (1%)

Query: 9   DDFAALLEESFASNDLAEGYVAKGIVTAIEKDVAIVDVGLKVEGRVPLKEFGAKSKDGTL 68
           + FA L E+S    +   G + +G V +I+  + +VD GLK E  +P  +F  K+  G L
Sbjct: 3   ESFADLFEQSLQQLEFRPGSIVRGTVVSIQNGMVLVDAGLKSESPIPADQF--KNAQGVL 60

Query: 69  K--VGDEVEVYVERIENALGEAVLSREKARREESWVKLEAKFEAGERVEGVIFNQVKGGF 126
           +  VGDEV+V ++ +E+  GE  LSREKA+R E+W+ LE  +E  E V GVI  +VKGGF
Sbjct: 61  EIAVGDEVDVALDSVEDGFGETQLSREKAKRHEAWIVLEKAYEDAETVIGVINGKVKGGF 120

Query: 127 TVDLDGAVAFLPRSQVDIRPIRDVTPLMHNPQPFEILKMDKRRGNIVVSRRTVLEESRAE 186
           TV+L+G  AFLP S VD+RP+RD   L +    F+++K+D++R N+VVSRR V+E   + 
Sbjct: 121 TVELNGIRAFLPGSLVDVRPVRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSA 180

Query: 187 QRSEIVQNLEEGQVVDGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEILNIGQQ 246
           +R  +++NL+EGQ V G+VKN+TDYGAFVDLGG+DGLLH+TDMAW+RV HPSEI+N+G +
Sbjct: 181 ERDALLENLQEGQAVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240

Query: 247 VKVQIIRINQETHRISLGMKQLESDPWDGISAKYPVGKKISGTVTNITDYGAFVELEPGI 306
           + V++++ ++E  R+SLG+KQL  DPW  IS +YP   K++G VTN+TDYG FVE+E G+
Sbjct: 241 INVKVLKYDRERTRVSLGLKQLGEDPWLEISKRYPENTKLTGRVTNLTDYGCFVEIEEGV 300

Query: 307 EGLIHISEMSWTKKNVHPGKILSTSQEVDVVVLEVDPSKRRISLGLKQTLENPWQAFAFS 366
           EGL+H+SEM WT KN+HP K+++   EV+V+VL++D  +RRISLGLKQ   NPW  FA  
Sbjct: 301 EGLVHVSEMDWTNKNIHPSKVVNLGDEVEVLVLDIDEERRRISLGLKQCKTNPWDDFAER 360

Query: 367 HPAGTEVEGEVKNKTEFGLFIGLEGDVDGMVHLSDLDWNRPGEQVIEEFNKGDVVKAVVL 426
           +  G +V G++K+ T+FG+FIGL+G +DG+VHLSD+ WN  GE+ + ++ KGD + AVVL
Sbjct: 361 YAKGDKVTGKIKSITDFGIFIGLDGGIDGLVHLSDISWNGTGEEAVSDYKKGDEISAVVL 420

Query: 427 DVDVEKERISLGIKQLGKDAVGEAATSGDLRKNAVVSCEVIAVNDGGVEVKLVNHEDITS 486
            VD E+ERISLG+KQ   D     A   D +K A+V+  V AV+  GV ++L   E +  
Sbjct: 421 SVDPERERISLGVKQTEDDPFN--AYLADKKKGAIVTGTVTAVDAKGVTIELA--ETVEG 476

Query: 487 FIRRNDLARDRDDQRPERFAVGQVFDARVVNFSKKDRKVMLSIKALEIAEEKEAVAQFGS 546
           ++R +D++R+R +     ++VG   +++ +   +K+R + LSI+A + A+EKEA+A    
Sbjct: 477 YLRVSDISRERIEDASTVYSVGDTVESKFMGVDRKNRSISLSIRAKDEADEKEAMANLNK 536

Query: 547 SDSGA 551
            D  A
Sbjct: 537 QDDVA 541