Pairwise Alignments

Query, 563 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 609 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  112 bits (279), Expect = 5e-29
 Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 19/207 (9%)

Query: 354 GNEHPVLTNINLAIACGERVAIVGASGAGKTSLIQLVA-------GELHPAAGSVRALPS 406
           G    V+ +++L I  GE+V +VG SGAGK++L+ L+        G +     ++R +  
Sbjct: 371 GEASGVIEDLDLKIKPGEKVGLVGRSGAGKSTLVNLLMRFHDVEQGSITIDGQNIREVEQ 430

Query: 407 T-------LMTQRSQLFRDSIADNLRLAKPAATGVELWEALEAAGLAEHVRTLPKR---- 455
                   ++TQ + L   SI DN+R  KP A+  EL  A+  A   E ++ L       
Sbjct: 431 DSLRANIGMVTQDTSLLHRSIRDNIRYGKPDASEEELENAIRQAQAYEFIQGLSDPEGNH 490

Query: 456 -LETKLGEAGQGLSGGQSRRLALARFLLADRPLWLLDEVTEGLDGETARDVLGRLFARVE 514
            L+ ++GE G  LSGGQ +R+A+AR LL + P+ LLDE T  LD E    +   L+  +E
Sbjct: 491 GLDAQVGERGVKLSGGQRQRIAIARVLLKNAPILLLDEATSALDSEIEAAIQESLYQLME 550

Query: 515 GKTVLMITHNRREAEFADRIIVLREGR 541
           GKTV+ I H        DR+IVL +G+
Sbjct: 551 GKTVIAIAHRLSTIAAMDRLIVLDQGK 577