Pairwise Alignments

Query, 508 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 598 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  135 bits (340), Expect = 4e-36
 Identities = 131/494 (26%), Positives = 216/494 (43%), Gaps = 27/494 (5%)

Query: 19  AWLEKVAARLSFRAARAALSQR---------RFEALQAVAKVSPLDLSRTASGEAAGIVA 69
           A L  +  RL+FR  +    Q          R +  Q V  ++     RT  G+    + 
Sbjct: 80  ALLATIVVRLAFRGVQGYYVQEVGQRVTADIRQDLFQHVTALAVRFFDRTPVGKLVTRLT 139

Query: 70  EAAEALVPYLSRFQPARMKATIVPLVFVLAILPFSWIAALVL-LLAMPTIPLFMALIGWQ 128
              EAL    S      +   +  L   +A+    W  AL+L +L +PT  + +     +
Sbjct: 140 NDVEALGEVFSTGAIGILSDIVSLLAIAIAMFWLQWQLALLLTVLLLPTTAVIL-YFQRR 198

Query: 129 AKAASEKQLAETGNINAFLLDRLRGLETIRTLKAVDLTAARLDADAQNLKKRTMAVLRIA 188
            + A+ +   E  N+NA L + + G+  +++ +     A +     Q   +   AV R  
Sbjct: 199 YRKANYRAREELSNLNASLQENMVGIGIVQSFRREAYNAQQFRVANQRYLE---AVDRTI 255

Query: 189 FLSSAVLELFAAIGVAMTAVYIGFHLLGFLDFGAWGEKLTLAEGLFILLLAPAFFEPLRE 248
           F  SA+      I +A  A      +L    F    +++        +L +   F+PLR+
Sbjct: 256 FHDSAISATLEWISLAAIAA-----VLWLGSFLVLQDQMNFGLLAAFILYSQRLFDPLRQ 310

Query: 249 LSAVWHDRAAGEASLNALATLTAGGAAIVGEG-ADVVRAPSSTPGLLEMENLSFAYPNAP 307
           L+  +    AG  ++  +  +      I        +   +S  G +  EN+ F Y    
Sbjct: 311 LAEKFTSIQAGFTAIERIVDIFNEPIEIRDAAQTQQLSLETSQSGEIHFENVWFGYKPDE 370

Query: 308 PVIRNFNLTVQQGERVAILGASGCGKSTILSLIAGLAEAGEGVIRIGGVTLDDATADGLR 367
           PVI+N N+T+Q G++VA++G +G GKSTI+ L+  L E  +G I I G+ + +     LR
Sbjct: 371 PVIQNLNITIQPGQKVALVGPTGAGKSTIIRLLCRLYEPTQGRILIDGIDIRNLPQVELR 430

Query: 368 GTIGWVSQKPFFFAASMKANIGFGRLAVSEAMVEEVLHRTGLDGLTQARRH---LQIGDG 424
             +G + Q  F FA  + +NI  G     EA V+    RT +  L ++        + + 
Sbjct: 431 RHLGVILQDGFLFAGDVSSNITLGEPYDQEA-VQAAARRTNVATLIESLPQGYATPLRER 489

Query: 425 GNGISGGEAVRLAIAR-AFADPATQLVLADEPTAHLDRETAALVTDNLLQLAKGRTLIVA 483
           G  +SGG+   LA AR A  DP  ++++ DE TA+LD  T ALV + L  L   RT I+ 
Sbjct: 490 GTNLSGGQRQLLAFARVAIRDP--KVLILDEATANLDVGTEALVQEALDDLLSDRTAIII 547

Query: 484 THDPVLAARMDRIV 497
            H        DRI+
Sbjct: 548 AHRLSTIRNADRIL 561