Pairwise Alignments

Query, 508 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 609 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  116 bits (291), Expect = 2e-30
 Identities = 109/441 (24%), Positives = 197/441 (44%), Gaps = 51/441 (11%)

Query: 87  MKATIVPLVFVLAILPFSWIAALVLL------LAMPTIPLFMALIGWQ------AKAASE 134
           ++ T+  L+ VL  +   +++ LV++      L +P +   M  +G Q       K  S 
Sbjct: 152 VRETVTKLLDVLVYILVYFLSMLVIIADADLRLMLPMLVWLMIYVGLQFYYLPKLKQVST 211

Query: 135 KQLAETGNINAFLLDRLRGLETIRTLKAVDLTAARLDADAQNLKKRTMAVLRIAFLSSAV 194
           +Q      +   ++D    + T++         +    +AQ  K+         FL +  
Sbjct: 212 EQADARSTMTGRIVDSYTNIATVKLF-------SHTQKEAQYAKESMTG-----FLDTVY 259

Query: 195 LELFAAIGVAMTAVYIGFHLLGFLDFGAWGEKLTLAEGLFILLLAPAFFEPLR------- 247
            ++    G+ ++   I + LL F    A    L     + I  +A A    LR       
Sbjct: 260 RQMRLVTGINVSVQVINY-LLAF-SVAAVSIWLWRDNAITIGAIAVAVSLSLRLNGMSQW 317

Query: 248 ---ELSAVWHDRAAGEASLNALATLTAGGAAIVGEGADVVRAPSSTPGLLEMENLSFAYP 304
              E+S+++ +       +N L+  T+       + +D     + + G +    +SF Y 
Sbjct: 318 IMWEISSLFENIGTVADGMNTLSRPTSV------QDSDNASQLTVSKGEIAFNRVSFHYG 371

Query: 305 NAPPVIRNFNLTVQQGERVAILGASGCGKSTILSLIAGLAEAGEGVIRIGGVTLDDATAD 364
            A  VI + +L ++ GE+V ++G SG GKST+++L+    +  +G I I G  + +   D
Sbjct: 372 EASGVIEDLDLKIKPGEKVGLVGRSGAGKSTLVNLLMRFHDVEQGSITIDGQNIREVEQD 431

Query: 365 GLRGTIGWVSQKPFFFAASMKANIGFGRLAVSEAMVEEVLHRTG----LDGLTQARRH-- 418
            LR  IG V+Q       S++ NI +G+   SE  +E  + +      + GL+    +  
Sbjct: 432 SLRANIGMVTQDTSLLHRSIRDNIRYGKPDASEEELENAIRQAQAYEFIQGLSDPEGNHG 491

Query: 419 --LQIGDGGNGISGGEAVRLAIARAFADPATQLVLADEPTAHLDRETAALVTDNLLQLAK 476
              Q+G+ G  +SGG+  R+AIAR     A  ++L DE T+ LD E  A + ++L QL +
Sbjct: 492 LDAQVGERGVKLSGGQRQRIAIARVLLKNA-PILLLDEATSALDSEIEAAIQESLYQLME 550

Query: 477 GRTLIVATHDPVLAARMDRIV 497
           G+T+I   H     A MDR++
Sbjct: 551 GKTVIAIAHRLSTIAAMDRLI 571