Pairwise Alignments

Query, 298 a.a., O-linked GlcNAc transferase from Agrobacterium fabrum C58

Subject, 371 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 70.1 bits (170), Expect = 7e-17
 Identities = 51/198 (25%), Positives = 87/198 (43%)

Query: 78  DPEGYNVRGSAYGRAGDSRRAIEDFNKALQLNPRFYQAYANRALVYRNSGQQQQALQDYN 137
           + E +  RG AY        A E F++A  L P   +    RA +    G   +A  D  
Sbjct: 71  EAEAHLQRGLAYLAQDRPELAFEHFSRAASLAPEMVEPRLQRARLLVRRGMPNEAAADIE 130

Query: 138 AALQINASYDVALIGRGNLYRQSGRVNEAFNDFSRAIELETTDGRAWHNRGLIYQLRNQH 197
           A L  +  +  A    G +    G ++EA  DF+RAI L+      + + G ++  + + 
Sbjct: 131 AVLAASPQHARAWELAGMVAFDRGLLDEAEADFTRAITLDPDLASCYAHLGAVHDYKGRP 190

Query: 198 AQAIEDFSKAISLSSTSPEPYNGRGLSYVALNDDENAFADFNHAISLDDKVAESWANQAL 257
             A + ++ A+     S E +N  G+++  L DD +A   F+ A+ L      SW N  L
Sbjct: 191 DLARDVYAAALVRFPQSGELHNNLGVAFSMLGDDASALHHFHEAVVLGASSERSWNNMGL 250

Query: 258 VYERRGDMAKAAKSYSHA 275
              R G   +A +++ +A
Sbjct: 251 ALCRLGRFDEAFEAFRNA 268



 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 51/220 (23%), Positives = 85/220 (38%), Gaps = 38/220 (17%)

Query: 63  ENIASLTSVINANPQDPEGYNVRGSAYGRAGDSRRAIEDFNKALQLNPRFYQAYANRALV 122
           E  A + +V+ A+PQ    + + G      G    A  DF +A+ L+P     YA+   V
Sbjct: 124 EAAADIEAVLAASPQHARAWELAGMVAFDRGLLDEAEADFTRAITLDPDLASCYAHLGAV 183

Query: 123 YRNSGQQQQALQDYNAALQINASYDVALIGRGNLYRQSGRVNEAFNDFSRAIELETTDGR 182
           +   G+   A   Y AAL                + QSG ++                  
Sbjct: 184 HDYKGRPDLARDVYAAALV--------------RFPQSGELH------------------ 211

Query: 183 AWHNRGLIYQLRNQHAQAIEDFSKAISLSSTSPEPYNGRGLSYVALNDDENAFADFNHAI 242
             +N G+ + +    A A+  F +A+ L ++S   +N  GL+   L   + AF  F +A 
Sbjct: 212 --NNLGVAFSMLGDDASALHHFHEAVVLGASSERSWNNMGLALCRLGRFDEAFEAFRNA- 268

Query: 243 SLDDKVAESWANQALVYERRGDMAKAAKSYSHAARLDPKY 282
                 A +  N    +   GD + A +    A  L+P+Y
Sbjct: 269 ---GGEAAAHNNLGYFFLVNGDASLAVQHLQRAVELEPRY 305



 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 29/101 (28%), Positives = 44/101 (43%)

Query: 180 DGRAWHNRGLIYQLRNQHAQAIEDFSKAISLSSTSPEPYNGRGLSYVALNDDENAFADFN 239
           +  A   RGL Y  +++   A E FS+A SL+    EP   R    V       A AD  
Sbjct: 71  EAEAHLQRGLAYLAQDRPELAFEHFSRAASLAPEMVEPRLQRARLLVRRGMPNEAAADIE 130

Query: 240 HAISLDDKVAESWANQALVYERRGDMAKAAKSYSHAARLDP 280
             ++   + A +W    +V   RG + +A   ++ A  LDP
Sbjct: 131 AVLAASPQHARAWELAGMVAFDRGLLDEAEADFTRAITLDP 171



 Score = 33.5 bits (75), Expect = 8e-06
 Identities = 22/70 (31%), Positives = 34/70 (48%)

Query: 216 EPYNGRGLSYVALNDDENAFADFNHAISLDDKVAESWANQALVYERRGDMAKAAKSYSHA 275
           E +  RGL+Y+A +  E AF  F+ A SL  ++ E    +A +  RRG   +AA      
Sbjct: 73  EAHLQRGLAYLAQDRPELAFEHFSRAASLAPEMVEPRLQRARLLVRRGMPNEAAADIEAV 132

Query: 276 ARLDPKYKPA 285
               P++  A
Sbjct: 133 LAASPQHARA 142



 Score = 25.0 bits (53), Expect = 0.003
 Identities = 8/21 (38%), Positives = 15/21 (71%)

Query: 93  GDSRRAIEDFNKALQLNPRFY 113
           GD+  A++   +A++L PR+Y
Sbjct: 286 GDASLAVQHLQRAVELEPRYY 306