Pairwise Alignments

Query, 332 a.a., glycine betaine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 344 a.a., histidine-binding periplasmic signal peptide protein from Sinorhizobium meliloti 1021

 Score =  159 bits (403), Expect = 7e-44
 Identities = 108/339 (31%), Positives = 166/339 (48%), Gaps = 21/339 (6%)

Query: 7   ATILSAGFAFSGGAAYAADCGNVTIASMNWQSAEVAANLDKFILEKGYGCSAEIVTGDTV 66
           A ++ A  A    A+Y  D   VT A ++W+S      + K IL KGY C  + + G++V
Sbjct: 13  AGLMLAASASGANASYCGDGKTVTFAGIDWESGAFITEVMKTILSKGYDCQVDSIPGNSV 72

Query: 67  PTLTSMAEKGQPDIAPEAWVSLQPEIVKHGLEGGKVVAAAKILSDGAVQGWWIPKYLADA 126
            TL          I  E W+  + ++    +E  KV+A  K    GA +GW++P Y+   
Sbjct: 73  -TLEQATANNDVQIFAEEWLG-RSDVWNKAVEEKKVIAVGKTFV-GASEGWFVPDYVVHG 129

Query: 127 NP---------DLKTIPDLF--KHPELFPAPEDKSKGAVFNGPQGWGGTVVTAQLFKAFG 175
           +P         DLK++  L   K  E+F  PE+ SKG   N P GW    V+    +A+ 
Sbjct: 130 DPARNIEAKAPDLKSVSQLTDPKIAEIFADPEEPSKGRFLNCPSGWTCEGVSTAKLEAY- 188

Query: 176 GEKAGFTLVD--TGSAAGLDGSIAKAYEAKQPWVGYYWAPTSLLGKYEMVKLGFGTEYDA 233
             K G T V+   G+   LD +I  AY   +P + YYW+PT++LGK+++++L     Y+ 
Sbjct: 189 --KLGETYVNFRPGTGTALDAAITSAYLQGEPILFYYWSPTAILGKFKLIQLE-EPAYNE 245

Query: 234 AEWKRCTSVADCPDPKPNAWQVDDVQTLVSKSFADRAGPAMDYLNKRAWTNATVNKLIAW 293
           A WK  +S     D +  A+   DV   V+ +FA  A   ++ L K  +    VN  +A+
Sbjct: 246 ACWKELSSANGKRD-EGCAFPSVDVAYGVNSTFASEAPEIVEILEKATFPLDEVNASLAY 304

Query: 294 MTDNQATGEDGAKQFLKENEALWKGWVSPEVAEKVKAAL 332
           M DN+      A +FLK    +W  WVS E   K++A L
Sbjct: 305 MADNKVDATAAAAEFLKTKGDIWSKWVSDEARGKIEAGL 343