Pairwise Alignments

Query, 295 a.a., glycine betaine ABC transporter permease from Agrobacterium fabrum C58

Subject, 245 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 46/177 (25%), Positives = 93/177 (52%), Gaps = 2/177 (1%)

Query: 100 TMKTVSMIFVCAVMSIVIGLPIGIAMARSNRLQ--NVVNPVLDVMQTMPSFVYLIPVVML 157
           T+  +  +FV  V + ++ + + I + R    +   +   ++++ QT P    L   V +
Sbjct: 51  TVLHLRTVFVATVAATIVAVSLAIIVTRKAGAEFLPLSRSLVNIGQTFPPVAVLALAVPI 110

Query: 158 LGIGRVPGVIAVIIYAIPPMIRLTNLGIRMVDHDVLEAADAFGSSKRQKLFKVQLPLALP 217
            G G  P +IA+ +Y + P+      G+  +   V+EAA   G + RQ+LF+++LPLALP
Sbjct: 111 YGFGEKPTLIALFLYGLLPIFENALTGLTTLPPTVMEAARGAGMTGRQRLFRIELPLALP 170

Query: 218 TIMAGINQTIMMALAMVVIASMIGVQGLGQPVLKAIANQYFTLGVFNGLAIVGIAII 274
            I+ GI  +++++LA   I S +  + LG+ ++  + +      +  GL +  +A++
Sbjct: 171 VILTGIRLSVVISLATATIGSTVAARTLGEVIIAGLQSNNLAFVLQGGLIVGALAVL 227