Pairwise Alignments

Query, 222 a.a., ribosomal large subunit pseudouridine synthase A from Agrobacterium fabrum C58

Subject, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

 Score =  111 bits (277), Expect = 2e-29
 Identities = 77/198 (38%), Positives = 115/198 (58%), Gaps = 13/198 (6%)

Query: 20  IVHRDDDLLVLDKPSGLLSVPGRD---PALSDSLMTRVQKQFPKALMINRLDKDTSGIVL 76
           IV+ DD LL+L+KPSG     G      A+      R Q +F +  +++R+D+DTSGI+L
Sbjct: 97  IVYEDDHLLILNKPSGTAVHGGSGLHFGAIEALRALRPQARFLE--LVHRIDRDTSGILL 154

Query: 77  MSLNRKAHAAIAAQFEKRETRKSYVAIVWGTVAGEEGEVDLPLAIDPDNKPRHRVDHENG 136
           ++  R A   + AQF ++  +K Y A+V G    E   V+ PL  +  N    RV+  NG
Sbjct: 155 VAKKRSALRHLQAQFREKTVQKYYYALVMGHWDAECKVVNAPLLKNEVNSIV-RVN-PNG 212

Query: 137 KPAQSLWRVLERLPLPATRLALTPLTGRTHQLRVHMKALGHPILGDEFYAEG--EALTA- 193
           KP+++ +R+LE+    AT +  +P+TGRTHQ+RVH + +GHPI  D+ Y +   +A TA 
Sbjct: 213 KPSETRFRILEKFA-EATLVQASPVTGRTHQIRVHTQYMGHPIAWDDRYGDRRFDAYTAQ 271

Query: 194 --APRLMLHAQEVGFRHP 209
               RL LHA  + F HP
Sbjct: 272 FGIERLFLHAANIQFVHP 289