Pairwise Alignments

Query, 222 a.a., ribosomal large subunit pseudouridine synthase A from Agrobacterium fabrum C58

Subject, 329 a.a., RluA family pseudouridine synthase (RefSeq) from Shewanella loihica PV-4

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 67/205 (32%), Positives = 119/205 (58%), Gaps = 14/205 (6%)

Query: 20  IVHRDDDLLVLDKPSGLL--SVPGRDPALSDSLMT-RVQKQFPKALMINRLDKDTSGIVL 76
           I+  D  ++VL+KP+G+      G D  + +++ + R Q++F +  +++RLDK+TSG++L
Sbjct: 108 ILFEDKAIIVLNKPAGIAVHGGSGVDFGVIEAMRSLRPQQKFLE--LVHRLDKETSGVLL 165

Query: 77  MSLNRKAHAAIAAQFEKRETRKSYVAIVWGTVAGEEGEVDLPLAIDPDNKPRHRVDHEN- 135
           ++  R+A   +  Q   ++ +K Y+A+V G     +  ++ PL +    K   R+   N 
Sbjct: 166 IAKKRRALKHLHDQLRYKKMQKDYMALVRGEWQNHDKVINAPL-LKLTLKSGERIVRVNQ 224

Query: 136 -GKPAQSLWRVLERLPLPATRLALTPLTGRTHQLRVHMKALGHPILGDEFYAEGEALTA- 193
            GKP+++ +++++R    AT +  +P+TGRTHQ+RVH +  GHPI  DE Y+E +   A 
Sbjct: 225 EGKPSETRFKIMQRYQ-GATLVQASPVTGRTHQIRVHCQYAGHPIACDEKYSEQKFDDAM 283

Query: 194 ----APRLMLHAQEVGFRHPDGRDV 214
                 RL LHA ++ F HP   +V
Sbjct: 284 RELGLNRLFLHAAQLKFTHPVSEEV 308