Pairwise Alignments

Query, 222 a.a., ribosomal large subunit pseudouridine synthase A from Agrobacterium fabrum C58

Subject, 297 a.a., RluA family pseudouridine synthase from Methanococcus maripaludis S2

 Score =  100 bits (249), Expect = 3e-26
 Identities = 63/198 (31%), Positives = 112/198 (56%), Gaps = 12/198 (6%)

Query: 18  LTIVHRDDDLLVLDKPSGLLSVPGRDPALSDSLMT------RVQKQFPKALMINRLDKDT 71
           L +++ DDDLL++DK   ++  P ++  LS +L        ++  Q  K   +NRLD DT
Sbjct: 82  LNVIYEDDDLLIVDKSKNMVVHPTKN-VLSGTLANAISNHQKINNQNYKIRFVNRLDMDT 140

Query: 72  SGIVLMSLNRKAHAAIAAQFEKRETRKSYVAIVWGTVAGEEGEVDLPLAIDPDNKPRHRV 131
           +G+++++ N  +H  +A Q ++    K Y+A+V G +  +EG ++  + ++ +   R   
Sbjct: 141 TGLLIVAKNSYSHQQLAKQMDEGILEKIYIAVVNGHLDLKEGIIEDSIDLNENGIKRELS 200

Query: 132 DHENGKPAQSLWRVLERLPLPATRLALTPLTGRTHQLRVHMKALGHPILGDEFYAEGEAL 191
           +   GK +++ ++V+E L   A+ L +  LTGRTHQ+RVH+ + G+ I+GD  Y  GE  
Sbjct: 201 NF--GKISKTKYKVIEELK-NASVLEINLLTGRTHQIRVHLSSTGNYIIGDTLY--GETS 255

Query: 192 TAAPRLMLHAQEVGFRHP 209
               R  LH+  + F HP
Sbjct: 256 KLIDRQALHSHILRFIHP 273