Pairwise Alignments

Query, 338 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 390 a.a., ribose ABC transporter, substrate-binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 94.0 bits (232), Expect = 6e-24
 Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 7/234 (2%)

Query: 31  IALSNNYAGNSWRQAMLTSWDKITKQAV-ADKQVAAADAFTTAENQATE--QAAQIQNLI 87
           I  +++YAGN+WR   L+   ++T+  +   +Q    D     ++   +  Q  QI+ L+
Sbjct: 64  IGYASSYAGNTWRAEGLS---RLTEDLLPVYRQAGLVDEIIVTQSDLNDARQIQQIRQLV 120

Query: 88  LQGYDAIVINAASPTALNGAVKEACDAGITVVSFDGIVTEPCAWRIAVDFKAMGESQIDY 147
            QG DAI++  ++P ALN AV+ A   G+ V S+ G +T   A   + ++   G      
Sbjct: 121 DQGVDAIIVCCSNPVALNKAVEYAYSKGVVVFSYSGYLTSDKALNASSNYTLGGYEIAKA 180

Query: 148 LAKAMPKGGNLLEIRGLAGVSVDDEIHAGIAAGVAKNPQFKIVGSVNGDWAQDVAQRAVA 207
           + + +   GN L + G+AG +  +    G    + + P  K+VG V G+W   VAQ  V 
Sbjct: 181 MIEEVGGEGNFLLVSGIAGAASSESFDTGAMRALEEFPNAKLVGQVWGNWTDQVAQTEVQ 240

Query: 208 GILPSLP-EVAAVVTQGGDGYGAAQAFAAAKRPTPTIVMGNREDELQWWKQQKD 260
             L + P  +  ++ QG    G  +A   + R    I +        + KQ  D
Sbjct: 241 KFLATNPARIDGIIAQGSQETGVLKAVLQSGREVMPISLAGSAGAACYLKQNPD 294