Pairwise Alignments

Query, 487 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  210 bits (535), Expect = 8e-59
 Identities = 149/496 (30%), Positives = 249/496 (50%), Gaps = 30/496 (6%)

Query: 8   EEVVAARGVKVVFGAVKALDGADLVIRAGECLGLVGHNGAGKSTIVNVINGGLTPHEGSI 67
           + ++A   ++  F  VKALD A L +  G  + L+G NGAGKST++ V+ G  +   GSI
Sbjct: 3   QAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSI 62

Query: 68  SY-GSDRNRQGIAAARASGVRCVFQELSLCPNLTISENVRIMHAAIS--GRNWRGRALVM 124
            Y G   + +G   ++ +G+  + QEL+L P LTI+EN+ +     S  GR         
Sbjct: 63  EYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRK 122

Query: 125 IRQTLDEIFPGHGIDCELTIAELSIAERQMVEIA--INFCSTPDAPRLVILDEPTSSLDA 182
             Q L  +   H    +  + ELS+ E+QMVEIA  ++F S     +++I+DEPT +L  
Sbjct: 123 ADQLLARLNVKHS--AKTLLGELSLGEQQMVEIAKALSFES-----KVIIMDEPTDALTD 175

Query: 183 GLAEQLMDYVRRFVRTGGSVLLISHILGEILSTATRIVVMKDGRVVANRPAGEFTTRTLV 242
              E L + +      G  ++ ISH L EI      I V++DG+ +      +     L+
Sbjct: 176 TETESLFNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLI 235

Query: 243 EAM--GSVVKQQDRQKSENRKAGEKVLSMPARRGEGLAFEAFRGEIIGLAGLGGHGQTEA 300
           E M    + +Q  R  ++      +V+ +       ++F   +GEI+G++GL G G+TE 
Sbjct: 236 EMMVGRKLEEQYPRIAAQQGDISLEVIGLTGSGVHDVSFTLKKGEILGVSGLMGAGRTEL 295

Query: 301 LLELYLARNS----------SWLPARKTD-----IAFVAGDRSLNGTFPLWSILKNLSIT 345
           +  +Y A  S          +  P    D     IA+++ DR  +G     S+ +N+S+ 
Sbjct: 296 MKVIYGALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLC 355

Query: 346 SLRDISSAGMVDRTKETERGDQWKKRIEIRTPDMGNKILSLSGGNQQKVLFARALATTAS 405
           +L  +S    +    E    D + +   I+TP     I +LSGGNQQKV  A+ L T   
Sbjct: 356 ALDQLSKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPK 415

Query: 406 TVLMDDPMRGVDIGTKQEVYDILRTEASHGRTFIWYSTEMDEI-RLCDRVYVFRDGAIQA 464
            +++D+P RGVD+G K+E+Y ++    + G + I  S+EM E+  + DR+ V  +G I  
Sbjct: 416 VLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISG 475

Query: 465 ELVGDEITEQNVLAAS 480
           E +  E  ++ ++A +
Sbjct: 476 EFMASEADQEKLMACA 491