Pairwise Alignments

Query, 313 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 93.6 bits (231), Expect = 6e-24
 Identities = 68/291 (23%), Positives = 138/291 (47%), Gaps = 10/291 (3%)

Query: 16  SLAFLLAAVFYMQPRAMSYTGMNLLFNLAVPIALATIAQMLIMSVNDLDLSMGTFVSFCA 75
           +L FL+  V ++ P   +   +  +       A+  +   L++    +DLS+G+ ++ C 
Sbjct: 37  ALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLALCG 96

Query: 76  CVTATF--LQTSPLTGI--AIFAGAIAVYAVLGAVIHIRNLPSIVVTLGMSFVWGGLAVL 131
              AT   ++   L  +  A+ AGA A+ A+ G +I    + + + TL    +  G+ ++
Sbjct: 97  AFAATLVAMEVPVLVAVPTALLAGA-ALGAISGIIIAKGKVQAFIATLVTMTLLRGVTMV 155

Query: 132 ILP----SPGGQAPA-FIRTLMTAKPPFVPIAIVASILIAVVAHYIVMRSSFGVLMRGVG 186
                  S G    A       T     +P+ +   +++   A Y++  + FG  +  VG
Sbjct: 156 YTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVYAVG 215

Query: 187 GNFRSVERSGWSVVGIRAATFALAGFFAVLSGIALVGLTTAADANIALRYTLLSIAGVIL 246
           GN  +   SG +V  ++   +A+ G  A L+GI +    ++A     + Y L +IA V+L
Sbjct: 216 GNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAAVVL 275

Query: 247 GGGEFVGGRVSPIGAVIGALTLTLAGSFLSFMRISPDWQIGAQGAILIIVL 297
           GG   +GG+   +G +IGAL +    + L+ + +S  +Q+ A+  ++++ +
Sbjct: 276 GGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAV 326