Pairwise Alignments

Query, 313 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 89/310 (28%), Positives = 141/310 (45%), Gaps = 27/310 (8%)

Query: 15  ASLAFLLAAVFYMQPRAMSYTGM-NLLFNLAVPIALATIAQMLIMSVNDLDLSMGTFVSF 73
           A L  LLA +   +P  +S   + N+L   +V + +A     LI++    DLS G  V  
Sbjct: 21  AVLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVT-QGTDLSAGRQVGL 79

Query: 74  CACVTATFLQTSP--------LTGIAIFAGAIAVYAVLGAVIHIRN--------LPSIVV 117
            A ++AT LQ+          L  I I A  I+V  ++GA+I + N        +   + 
Sbjct: 80  AAVISATLLQSMDNVNKVFPSLGEIPILAVIISV-CLIGAIIGLVNGVIVAYLKVTPFIA 138

Query: 118 TLGMSFVWGGLAVLILPSPGGQAPA-FIRTLMTAKPPFVPIA------IVASILIAVVAH 170
           TLG   +  G+  L   S G    A F     T    F+ I       I    +IA++  
Sbjct: 139 TLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAIIAIIFM 198

Query: 171 YIVMRSS-FGVLMRGVGGNFRSVERSGWSVVGIRAATFALAGFFAVLSGIALVGLTTAAD 229
           +++   + FG  +  VGGN  + + SG +V       +AL+G F    G+   G   +A 
Sbjct: 199 WVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGRIGSAT 258

Query: 230 ANIALRYTLLSIAGVILGGGEFVGGRVSPIGAVIGALTLTLAGSFLSFMRISPDWQIGAQ 289
            N+   Y L +IA  ++GG  F GG  S  G V G L  T+    ++++ +SP WQ   +
Sbjct: 259 NNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYWQYIIK 318

Query: 290 GAILIIVLAL 299
           G+I+I  +AL
Sbjct: 319 GSIIIFAVAL 328