Pairwise Alignments

Query, 313 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 339 a.a., ABC transporter permease from Rahnella sp. WP5

 Score = 93.2 bits (230), Expect = 8e-24
 Identities = 67/284 (23%), Positives = 139/284 (48%), Gaps = 18/284 (6%)

Query: 40  LFNLAVPIALATIAQMLIMSVNDLDLSMGTFVSFCACVTATF-LQTSPLTGIAIFAGAIA 98
           +FN   P+AL  +   L+++   +DLS+G  ++      AT  +Q  PL  + +   ++ 
Sbjct: 60  IFNRGAPVALLALGMTLVIATGGIDLSVGAVMAIAGATAATMTVQGYPL--MIVLLASVG 117

Query: 99  VYAVLGA----VIHIRNLPSIVVTLGMSFVWGGLAVLILPSPGGQAPAF----IRTLMTA 150
           V A+ G     ++ +  +  IV TL +     G+A LI     GQ   F    +    + 
Sbjct: 118 VGAICGLWNGFLVAVLQIQPIVATLMLMVAGRGIAQLITE---GQIVTFEHNGLSQFGSG 174

Query: 151 KPPFVPIAIVASILIAVVAHYIVMRSSFGVLMRGVGGNFRSVERSGWSVVGIRAATFALA 210
              ++P+ ++ ++ + V+   +  +++ G+ +  VG N RS   +G +   +  +T+ + 
Sbjct: 175 SLFYLPMPVIIAVAMLVLVWALTRKTALGLFIESVGINIRSAYNAGVNARLVLISTYVIC 234

Query: 211 GFFAVLSGIALVGLTTAADANIA-LRYTLLSIAGVILGGGEFVGGRVSPIGAVIGALTLT 269
           G  A ++G+ +      ADAN A L   L +I  V++GGG  +GGR + + +V+GAL + 
Sbjct: 235 GICAAVAGVIITADIRGADANNAGLWLELDAILAVVIGGGSLLGGRFNLLLSVVGALIIQ 294

Query: 270 LAGSFLSFMRISPDWQIGAQGAILIIVLAL---RILLNRLEKRE 310
              + +      P++ +  +  +++ VL +   R+  + L +R+
Sbjct: 295 GMNTGILLSGFKPEFNLVLKALVVLAVLVVQSPRVSFSNLFRRK 338