Pairwise Alignments

Query, 313 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 329 a.a., ABC transporter permease from Escherichia coli Nissle 1917

 Score =  100 bits (250), Expect = 4e-26
 Identities = 70/272 (25%), Positives = 136/272 (50%), Gaps = 21/272 (7%)

Query: 38  NLLFNLAVPIALATIAQMLIMSVNDLDLSMG-------TFVSFCACVTATFLQTSPLTGI 90
           N++  +++ IA+       ++ + D+DLS+G       TF +  A     F+   PL+ I
Sbjct: 56  NIILQVSI-IAITAYGMTYVLLLGDIDLSVGSTIALIGTFAALGASWGIPFVLLVPLSII 114

Query: 91  AIFAGAIAVYAVLGAVIHIRNLPSIVVTLGMSFVWGGLAVLILPSPGGQAPAFIR----- 145
           A    A+A+  + G +  I  +PS +VT+    ++ G+A ++        P  I+     
Sbjct: 115 A----ALALGMINGGLTAIAGIPSFIVTVATMGIFRGIAYIVTDG----MPIMIKDDAFL 166

Query: 146 TLMTAKPPFVPIAIVASILIAVVAHYIVMRSSFGVLMRGVGGNFRSVERSGWSVVGIRAA 205
            L   +  ++PI I   I++ ++ H+I+ +++FG  +   GGN  +   SG +V  ++  
Sbjct: 167 ALGNGEFLYIPIPIWILIILLLINHFILTKTTFGRKIYITGGNKEAAIYSGINVTRLKIK 226

Query: 206 TFALAGFFAVLSGIALVGLTTAADANIALRYTLLSIAGVILGGGEFVGGRVSPIGAVIGA 265
            F +    A +SG+ L     +   N AL Y L +IA  +LGG    GG  + +G VIGA
Sbjct: 227 VFMITAVLAGISGMILASRLYSGQPNSALSYELDAIAAAVLGGTSLNGGYGTVVGTVIGA 286

Query: 266 LTLTLAGSFLSFMRISPDWQIGAQGAILIIVL 297
           LT+ +  + ++ M +   +Q+  +G ++++ +
Sbjct: 287 LTIGVINNGMNLMNVPYFYQMVVKGLVILVAV 318